Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g0878 ATGACCACCACCACCAGTATCACCGGCGGCGGCGGCGGAGAGGACCGTGTCCTTGCGACAGCTCAGCAGATTATGAAGAGCCTCAACACTCCAAAAGATGTTCGCGAAGACATGCTCTTAATCTTCTCTACCTTCGATAACCGCCTCTCCGGAATCTCCGACCTAATCAACGGTGAAGAGTCCAACAACAAGAACGAAGAAGATCTTCAACGCTTCCAAGCCGCTGAGAAAGTCATTCTCCGTTGGGACCCTTCCTTCTCTACTGAACCTTCCCGCCACTTCAACTCTCTCCTCGATTCCAAAAACGACGCCGTTGACTACTTCTCCGCCCTCGACGAAATCATAGACTTCATGGAGCAATTATCGGTCGCGCCGCCACCGTCATGTGACGGAAAAAGCGGACAAGTCATGGTGGAGCGTGCTGAAAACGCGATCCAGCTCGCGATGTCGAGGCTCGAGGACGAGCTGCGACACGTGCTGATTCGCAACACTGTCCCGCTCAACGCAGAGAGACTCCGCGGTTCGATGAAGAAGGTTTCGCTCTCTTTCGCTTCGCACATTGACGAGAATTTGGAGAGTTTCGGTGATCATGAAATCGGCGACCGCGGTTATGATCGGTTTCACTCACGTGGTGCCAGCTTGGACGATGAAGTGATTGTCGATTTGGTGAATCCTGATGCGGTTCTTCAGCTAAGAGAGATCGTTGAGCGAATGGTAAGATCTGGTTATGAAAGAGAGTGCCTTCAGGTTTATAGCAGTGTTCGTCGTGATGCTTTAGACGAGAGTTTGGTAATTCTTGGTGTTGAGAGATTGAGTATTGAAGAGGTGCAGAGGATAGAGTGGGAAAGTTTGGATGAAAAGATGAAAAATTGGGTTCATGCAGTTAAGATTGCTGTTAGAGTATTGTTGTGTGGTGAGAAGAGATTGTGTGATAGTGTGTTTAGTGATTTGGATGAGAATTACTTGATGAAGAAGATTTGTTTTAATGAGACTGCTAAAGGATGTGTGCTGCAGTTGTTGAATTTTGGCGAGGCTGTTACGATTTGTAAAAGGTCGCCGGAGAAGTTGTTTAGGATATTGGATATGTATGAGGCTTTGAGGAATGCCTTGCCTGATTTGGGGGCTTTGGTTTTGGATGAGCTTGTGATTGGAGAGGTTAGAGGAGTGCTGAGTGGACTTGGCGAAGCGGCAAAGGGAACGTTTGCTGAGTTTGAGAATTGTATTAGGAATGAGACTTCCAAAAAGCTGGTCATAACTGGGGATGTTCATCCACTGCCTCGTTATGTGATGAATTACCTTAAGTTGCTTGTGGATTACGGAGAACTTTTGAATTTGCTCTTACAAACTAATGATGAGGATCTTCACCGTTTTCAGAATGATTTTGGTGGTGATAGTTCTCAGTTTGAGTCCATGTCCCCCTTAGGGCGTCGAGTGCTGTTACTAATGTCTCAGCTTGAGTCTAATCTTGGGGAAAAATCAAGACTCTATGAAGACAATGCAATGCAGCATGTATTTCTGATGAACAATCTCCATTACCTAGTGCGAAAAGTGAAAGACTCGGATCTTGGAAAGGTGTTGGGAGATGATTGGATTCGCAAGCGACGTGGTCAGATACGCCAATGTGCTACAGGCTATCTCAGAGCCTCTTGGAGCAAGGCCTTGTCTTGTTTGAAGGACGACGGGATTGGAGGGAGCTCTAGGAGCTCATCAAAGATGACTTTGAAGGACAAGTTCAAGAATTTCAATTCATGTTTTGAAGAAATATACAGGATTCAGACAGGTTGGAAGGTACCGGAAGAGCAGCTTCGGGAAGAGCTACGGATATCTATATCAGAGAAGGTGATTCCTGCTTACCGCTCATTTCATGGGAGGTTTAGTACTCAGCTAGATGGAAGGCATGCTGGGAGATATGTAAAGTATACACCTGACAGTTTAGAAATCTATTTATTGGATTTATTTGAAGGAAATCCCGCTGTATTGAATCACATGAAGAGAAAAATACCCAGTCACAAAGTAACACCAGATAAACTGGTGCAAGAAACAAGGGGAGTTTATATGCAATCAGATGGTGAAAACTACGTGGATATGAGATATCTTGTGTCAATAGAGCATTATTCTAACCGCTCAGAAGAAGTGAGATCCTCAAAGAAGTCCCCTGAAGTTGTTGCAGCAGATCCAAGGCCTAAGGCTTCTAGCTCTAGAGCAAAGGTTATTCCATTAGCTGCAGCTGCAATAGCACTTGCACTTGATGGAGTTGATGGACTCTTAGGAGTTGAAGGTTCAGACTGGAAAGAATATGGTCATATTGGCTTAGTGCGAGTATGA 2325 0.4538 MTTTTSITGGGGGEDRVLATAQQIMKSLNTPKDVREDMLLIFSTFDNRLSGISDLINGEESNNKNEEDLQRFQAAEKVILRWDPSFSTEPSRHFNSLLDSKNDAVDYFSALDEIIDFMEQLSVAPPPSCDGKSGQVMVERAENAIQLAMSRLEDELRHVLIRNTVPLNAERLRGSMKKVSLSFASHIDENLESFGDHEIGDRGYDRFHSRGASLDDEVIVDLVNPDAVLQLREIVERMVRSGYERECLQVYSSVRRDALDESLVILGVERLSIEEVQRIEWESLDEKMKNWVHAVKIAVRVLLCGEKRLCDSVFSDLDENYLMKKICFNETAKGCVLQLLNFGEAVTICKRSPEKLFRILDMYEALRNALPDLGALVLDELVIGEVRGVLSGLGEAAKGTFAEFENCIRNETSKKLVITGDVHPLPRYVMNYLKLLVDYGELLNLLLQTNDEDLHRFQNDFGGDSSQFESMSPLGRRVLLLMSQLESNLGEKSRLYEDNAMQHVFLMNNLHYLVRKVKDSDLGKVLGDDWIRKRRGQIRQCATGYLRASWSKALSCLKDDGIGGSSRSSSKMTLKDKFKNFNSCFEEIYRIQTGWKVPEEQLREELRISISEKVIPAYRSFHGRFSTQLDGRHAGRYVKYTPDSLEIYLLDLFEGNPAVLNHMKRKIPSHKVTPDKLVQETRGVYMQSDGENYVDMRYLVSIEHYSNRSEEVRSSKKSPEVVAADPRPKASSSRAKVIPLAAAAIALALDGVDGLLGVEGSDWKEYGHIGLVRV 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g0878 774 Pfam Exo70 exocyst complex subunit 289 650 IPR046364 GO:0000145|GO:0005546|GO:0006887
Lal7g0878 774 SUPERFAMILY Cullin repeat-like 72 654 IPR016159 -
Lal7g0878 774 Coils Coil 138 158 - -
Lal7g0878 774 PANTHER EXOCYST COMPLEX PROTEIN EXO70 56 667 IPR004140 GO:0000145|GO:0006887
Lal7g0878 774 Gene3D Exocyst complex component Exo70 95 661 - -
Lal7g0878 774 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 56 667 - -
Lal7g0878 774 MobiDBLite consensus disorder prediction 709 723 - -
Lal7g0878 774 MobiDBLite consensus disorder prediction 709 728 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g0878 Lal-Chr7 15325930 15333898 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g0878 15 666 EXO70 exocyst subunit family AT5G50380 58.850 0.0 761
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g0878 K07195 - gmx:100818693 951.814
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g0878 7 15325930 15333898 Lal7g0878 7 15325930 15333898 ECH
Lal14g1463 14 15706837 15708867 Lal7g0878 7 15325930 15333898 LSH
Lal7g0878 7 15325930 15333898 Lal19g1027 19 14115848 14117839 LSH
Lal17g0818 17 6018799 6023878 Lal7g0878 7 15325930 15333898 PCT
Lal4g0686 4 5384525 5389705 Lal7g0878 7 15325930 15333898 PCT