Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g0874 ATGGACTGGAATTTGAAATCACCTTCTTTGGATTTGACTGAAGTGGATCAAGGAACAGTTTTTCTCAACATGGAAACAGTGGATAAAGGGTCAAGTGGGTTTGGAATATACAGAACAAAAGGGGAGTTTTCTGTGGACTTGAAGCTTGGTCAGGTTGGGAATAATGTTGGCATAGAATCAATGTTGTATAAGCCTAAAGATGCTGTTTCTGGTGCTGGACTTTCCAAAATGGTATCAACCTTAGCTTCAGGGTCATCTAAGAGGGCTAGAGCCTTTAACAATGGGAACCACACAGTTACATGCCTTGTGGATGGGTGCAAAGCTGATCTTAGTAATTTTAGGGACTATCATAGGCGCCATAAGGTGTGTGAACTTCATTCCAAGACTCCTCAGGTCACAATTGGTGGCCGGAACCAAAGGTTCTGCCAACAATGTAGCAGGTTCCATTCACCGGAGGAATTTGATGAGGGAAAGAGAAGCTGCAGAAAACGCTTAGATGGACACAACCGAAGGAGAAGAAAGCCTCAACCAGAACCACTCATGTGTTCTAGTAGTTTTTTGTCCAATTACCAAGGCACCCAGTTGCTACCCTTCTCAAGTGCACAAATATACTCTTCCCCTTCTGTGGTGATTCCTGCTTGGAATGAAGAAGTTATTCCTTCTCAACACCAACAAGTAAATTTCATTGATAAACAAGACCTTTTTCTTGGATCTTCTCCAACCACAAGCTACAAAGAAGGGAAACAACTTGCATTCTTACAAGGTGATCACAATTCCACTGCCACACTCAACAATCAAAACACAAATCTTGAGACACTTCTCAGAACTAGCCCTTACTCAGAAAGTAGTGAAGGAATGAGATGCAAAATGTTCTGTGATAATAGCCTAACAAGTTCTGTTCATGACTCTCCTTGTGCTCTCTCTCTTCTGTCATCACATAACACTCATGGAAATGGATTGAACCAAATGGTGCAGCCTCATTCATCATCACTTATGCAACCCTTAGGCCTGAGCCTGCATGATAATAATAGCTTGGAACCTGTGAACTCAGTGTATAACATTGGCTCTAATGGATCTCAAGGAAGTGATGCTCCTCAACTATTTCCCTTTCAATGGGAATAG 1122 0.4207 MDWNLKSPSLDLTEVDQGTVFLNMETVDKGSSGFGIYRTKGEFSVDLKLGQVGNNVGIESMLYKPKDAVSGAGLSKMVSTLASGSSKRARAFNNGNHTVTCLVDGCKADLSNFRDYHRRHKVCELHSKTPQVTIGGRNQRFCQQCSRFHSPEEFDEGKRSCRKRLDGHNRRRRKPQPEPLMCSSSFLSNYQGTQLLPFSSAQIYSSPSVVIPAWNEEVIPSQHQQVNFIDKQDLFLGSSPTTSYKEGKQLAFLQGDHNSTATLNNQNTNLETLLRTSPYSESSEGMRCKMFCDNSLTSSVHDSPCALSLLSSHNTHGNGLNQMVQPHSSSLMQPLGLSLHDNNSLEPVNSVYNIGSNGSQGSDAPQLFPFQWE 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g0874 373 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 13A ISOFORM X1 6 365 - -
Lal7g0874 373 Pfam SBP domain 101 174 IPR004333 GO:0003677
Lal7g0874 373 ProSiteProfiles Zinc finger SBP-type profile. 98 175 IPR004333 GO:0003677
Lal7g0874 373 Gene3D - 92 162 IPR036893 GO:0003677|GO:0005634
Lal7g0874 373 SUPERFAMILY SBT domain 99 180 IPR036893 GO:0003677|GO:0005634
Lal7g0874 373 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 6 365 IPR044817 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g0874 Lal-Chr7 15293022 15296263 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g0874 1 373 SBP-box Gene Family AT5G50670 39.637 1.70e-66 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Lal7g0874 SBP 1.9e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g0874 - - gmx:100806507 456.447
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g0874 7 15293022 15296263 Lal7g0874 7 15293022 15296263 ECH
Lal14g1451 14 15646268 15650480 Lal7g0874 7 15293022 15296263 LSH
Lal7g0874 7 15293022 15296263 Lal19g1022 19 14077846 14082071 LSH