Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g0864 ATGAACAAGATGAATTTTGTTAAGAATGGAATAAGCATGTTACCTCCTGGTTTTCGTTTTCAACCAACAGATGAAGAACTTGTGTATCAATACTTGAAATGTAAGGTCTTTTCATACCCTTTGCCTGCTTCTATTATTCCTGAGATCAATGTCTGCAAGTATGATCCTTGGGATTTACCAGGGAACTGTGATGAACAAGAAAGGTACTTTTACAGCACAAAGGAAACTAAGTATCCAAATGGTAATCGCATGAACAGAACAACAAACTCAGGTTATTGGAAAGCAACAGGATCAGATAAGAGAATTTCATCTTCAACTTCAACGTGTGATAGTGTTGTTGGGACAAGAAAAACTCTTGTTTTCTATGAAGGAAAATCTCCAGATGGATCTAGAACTCATTGGGTCTTGCATGAATATCGCCTTCTCACTATACAAAACAACTATGTGAACGAGATAGGAGATTGGGTTCTATGTCGCTTATTAATGAAGAAAAGAAGTGTAATAGAAAGTGATGGTAGCACCATTCCCATGCATAAAATAAATACAACTAGGAATCTTCCAAGGTTGTTTGATTTTATGATGGTAAGCAAGAGTACCCATTCTTCAACATCATCATCATGTTCAAGTTCCAGCAATAATGTAGAGGTGTCTTTAGATCAAGAAGAAACAAGTGGTAATGCTGATTTTTAA 690 0.3594 MNKMNFVKNGISMLPPGFRFQPTDEELVYQYLKCKVFSYPLPASIIPEINVCKYDPWDLPGNCDEQERYFYSTKETKYPNGNRMNRTTNSGYWKATGSDKRISSSTSTCDSVVGTRKTLVFYEGKSPDGSRTHWVLHEYRLLTIQNNYVNEIGDWVLCRLLMKKRSVIESDGSTIPMHKINTTRNLPRLFDFMMVSKSTHSSTSSSCSSSSNNVEVSLDQEETSGNADF 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g0864 229 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 1 229 - -
Lal7g0864 229 MobiDBLite consensus disorder prediction 200 229 - -
Lal7g0864 229 Gene3D NAC domain 23 168 IPR036093 GO:0003677|GO:0006355
Lal7g0864 229 Pfam No apical meristem (NAM) protein 15 141 IPR003441 GO:0003677|GO:0006355
Lal7g0864 229 SUPERFAMILY NAC domain 9 163 IPR036093 GO:0003677|GO:0006355
Lal7g0864 229 ProSiteProfiles NAC domain profile. 14 163 IPR003441 GO:0003677|GO:0006355
Lal7g0864 229 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 1 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g0864 Lal-Chr7 15201668 15203828 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g0864 1 166 NAC Transcription Factor Family AT5G13180 63.253 1.62e-74 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lal7g0864 NAM 1.4e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g0864 - - gmx:100812015 335.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g1011 19 13974574 13976692 Lal7g0864 7 15201668 15203828 ECH
Lal13g1554 13 15330897 15333476 Lal7g0864 7 15201668 15203828 ECH
Lal24g1195 24 13193140 13195380 Lal7g0864 7 15201668 15203828 ECH
Lal7g0864 7 15201668 15203828 Lal7g0864 7 15201668 15203828 ECH
Lal14g1434 14 15554391 15556209 Lal7g0864 7 15201668 15203828 LSH
Lal7g0864 7 15201668 15203828 Lal19g1011 19 13974574 13976692 LSH