Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g0858 ATGGCTCCCTCAGACCACTACTCTTTTGTCCCTTCATTCTTATACTCATCAAAAGCACTCTCCCATTTGGATACTACTTCCATCAACAACACCAATGATCATGTGTTACCATCATCAAATGATAGGAACAAGAATCCTATGATGATTCCTGCACCTAAGGAGAGTATTCCCATGTTTTCTCCTACTTACTATGCTGCATGTTCTTTTGGTGGCATCTTCAGCTGTGGCCTTACACACATGACAGTTACTCCCCTTGATCTTGTCAAGTGCAACATGCAGATTGACCCTCAAAAATACAAGAGCATCACATCAGGGTTTGGAGTATTATTTAAGGAGCAGGGAGCTAAAGGATTCTTTAGAGGATGGGTTCCAACTTTGCTTGGTTACAGTGCTCAGGGAGCATGCAAGTTTGGATTTTATGAGTTTTTCAAAAAGTACTACTCGGATCTTGCAGGAGCAGAGAATGCAGTAAAGTACAAAACCTTCATATATCTAGCTGGTTCAGCTTCAGCAGAAGTGATTGCTGATGTTGCCTTATGCCCCATGGAAGCAGTCAAAGTTCGTGTACAAACTCAGCCTGGTTTTGCTCGAGGTTTATCTGATGGGTTCCCCAAGTTTGTGAAGGCTGAGGGTGCTTCCGGGCTGTATAAAGGGCTTGTTCCTCTTTGGGGCCGCCAGATTCCATACACAATGATGAAATTTGCTTCCTTTGAGACTATTGTGGAGATGATATACAAATATGCCATCCCAACCCCTAAAGAACAGTGCAGCAAAAATAAGCAGCTTGGAGTTAGTTTTGCAGCAGGATATGCAGCAGGTGTACTATGTGCTATTGTCTCACACCCTGCTGATAATCTTGTTTCTTTTCTTAACAATGCCAAAGGAGCCACTGTTGGTGATGCTGTGAAGAAGATTGGGTTGGTTGGTCTTTTCACACGTGGCCTTCCTCTTCGTATAGTTATGATTGGAACACTAACTGGAGCACAATGGGGACTCTACGATTCTTTCAAAGTATATGTAGGACTGCCTACAACTGGTGGAAGTGCTCCTGCACCTACCAAGTAA 1065 0.4338 MAPSDHYSFVPSFLYSSKALSHLDTTSINNTNDHVLPSSNDRNKNPMMIPAPKESIPMFSPTYYAACSFGGIFSCGLTHMTVTPLDLVKCNMQIDPQKYKSITSGFGVLFKEQGAKGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDLAGAENAVKYKTFIYLAGSASAEVIADVALCPMEAVKVRVQTQPGFARGLSDGFPKFVKAEGASGLYKGLVPLWGRQIPYTMMKFASFETIVEMIYKYAIPTPKEQCSKNKQLGVSFAAGYAAGVLCAIVSHPADNLVSFLNNAKGATVGDAVKKIGLVGLFTRGLPLRIVMIGTLTGAQWGLYDSFKVYVGLPTTGGSAPAPTK 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g0858 354 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 4 354 IPR044677 GO:0005315|GO:1990547
Lal7g0858 354 Pfam Mitochondrial carrier protein 161 247 IPR018108 -
Lal7g0858 354 Pfam Mitochondrial carrier protein 64 148 IPR018108 -
Lal7g0858 354 Gene3D Mitochondrial carrier domain 64 340 IPR023395 -
Lal7g0858 354 PANTHER PHOSPHATE CARRIER PROTEIN 4 354 - -
Lal7g0858 354 SUPERFAMILY Mitochondrial carrier 63 334 IPR023395 -
Lal7g0858 354 ProSiteProfiles Solute carrier (Solcar) repeat profile. 260 339 IPR018108 -
Lal7g0858 354 ProSiteProfiles Solute carrier (Solcar) repeat profile. 62 146 IPR018108 -
Lal7g0858 354 ProSiteProfiles Solute carrier (Solcar) repeat profile. 159 243 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g0858 Lal-Chr7 15140899 15144256 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g0858 4 352 Chloroplast and Mitochondria Gene Families AT5G14040 75.549 0.0 548
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g0858 K15102 - gmx:100800530 599.742
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g1008 19 13943628 13946699 Lal7g0858 7 15140899 15144256 ECH
Lal7g0858 7 15140899 15144256 Lal7g0858 7 15140899 15144256 ECH
Lal16g1235 16 8614040 8619213 Lal7g0858 7 15140899 15144256 LSH
Lal7g0858 7 15140899 15144256 Lal19g1008 19 13943628 13946699 LSH