Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g0853 ATGGCATCAAATTCTCAGAAAATTGTTGAGGCTGCTTCAACTGATTCTCCAACAGCAACACCAGAAGTTGGAAAACAATCTGCAACAACAACAGAAGTTGAAAGAATCAAAGCCACAAGGTACCCAAGGTGGACAAGACAAGAAACACTTCTTCTCATTGAAGCAAAGAAAATGGTGGAAAATAGAGACCATCTTTGCAACTTCAATTCATCATCATCTATCCTTAATCACACTGATCCAAAATGGAACATAGTGTCATCATGTATTCAGCAAAAAGGTGTGAAAAGAGGACCTCTTCAGTGCAGAAAAAGATGGGGCAATCTTCTCACTGATTTCAGAAAGGTTAAGAAATATGAGACAGATACAAAAGGTGATGATGGTGAATCTTTTTGGATGATGAGGAGTGATAAAAGGAAAGAAAACAAGTTACCAGGGTTCTTTGATGAAGTGGTGTTTAGGGTTTTAGATGGTGAGGCTTTAAGTGGTGCTACATTGCCTTTGGCTTTGATTAAGATGGCATCAAAACCTGAGAATAGTGCTGAGAATGTTGAAAAAATGAAGTTATTAGGGCAAAGTGAGGATGATGAAGATGATGAAGATTATGAAGATGATGAAGATGAAACTGTATATGATAGTGAGAAAAAGTATTGGGAGGGAAACAGTGAAAGAAAAATGGTATTCAGTGCAATAAAAGCATCAACTTCTAAGGAAACATTTCTGAGAGGAAGTGTCAAAGTAACACCTACACTTGCACTTGCACTTGCACTAGCACCTCCTGGTTGTCAGAAAGAACCTGAGTCTGAAGAGGGATACAAGAAAAGGAGATTATCACCAGAAAATCATGAAGACAGAAATAATTTCAGCAATGATATTATGAAAGTGCTAAGGAGGAATAATAACATGATGAAAACCTATCTTGAAGCTCAGCACATGAATCATCAATTGGCCATGGAGCAGCAGAAGGAACAATCAAACAAGTTAGTTGCAGCTCTTGGCAAGATCACAGATGCTATCACAAAAATTGCTGACAAAAAGTAA 1038 0.3767 MASNSQKIVEAASTDSPTATPEVGKQSATTTEVERIKATRYPRWTRQETLLLIEAKKMVENRDHLCNFNSSSSILNHTDPKWNIVSSCIQQKGVKRGPLQCRKRWGNLLTDFRKVKKYETDTKGDDGESFWMMRSDKRKENKLPGFFDEVVFRVLDGEALSGATLPLALIKMASKPENSAENVEKMKLLGQSEDDEDDEDYEDDEDETVYDSEKKYWEGNSERKMVFSAIKASTSKETFLRGSVKVTPTLALALALAPPGCQKEPESEEGYKKRRLSPENHEDRNNFSNDIMKVLRRNNNMMKTYLEAQHMNHQLAMEQQKEQSNKLVAALGKITDAITKIADKK 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g0853 345 SMART sant 40 111 IPR001005 -
Lal7g0853 345 MobiDBLite consensus disorder prediction 193 209 - -
Lal7g0853 345 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASR3 25 344 - -
Lal7g0853 345 MobiDBLite consensus disorder prediction 189 211 - -
Lal7g0853 345 MobiDBLite consensus disorder prediction 1 31 - -
Lal7g0853 345 Pfam Myb/SANT-like DNA-binding domain 43 123 IPR044822 -
Lal7g0853 345 ProSiteProfiles Myb-like domain profile. 43 109 IPR001005 -
Lal7g0853 345 Gene3D - 44 114 - -
Lal7g0853 345 MobiDBLite consensus disorder prediction 259 288 - -
Lal7g0853 345 MobiDBLite consensus disorder prediction 265 288 - -
Lal7g0853 345 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 25 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g0853 Lal-Chr7 15091492 15094304 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g0853 23 119 Trihelix Transcription Factor Family AT1G13450 31.959 9.33e-06 44.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lal7g0853 Myb_DNA-bind_4 6.1e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g0853 - - lang:109338322 524.242
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g1001 19 13877393 13879042 Lal7g0853 7 15091492 15094304 ECH
Lal7g0853 7 15091492 15094304 Lal7g0853 7 15091492 15094304 ECH
Lal14g1423 14 15477095 15478965 Lal7g0853 7 15091492 15094304 LSH
Lal7g0853 7 15091492 15094304 Lal19g1001 19 13877393 13879042 LSH