Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g0842 ATGCCTCTTTTAAGGAGAAAGCCTTTTACTTTGGTCGAGCCACCTAAGGATTTGAAGCCAGATGAGCTGGTTTACCAAATTCGATTTACAAAGGAAATATTTCGAGATTATCATAGTGAATACTTGAACCATTTAAATCTATATCGCCAGAGGATTTGGATGTGTAAAGTCTCTGGAAAAACTAGCTTGACTTATGAAGAGGCTTTGGTGTCAGAACAACATGCCACTGAGAAAGTTAAACAGTTTCCTAAAGAATTAATGACACCTGCTCTAAACATTATCCAGTACAGTATGCTCCCTTTGAAGGATCTTGCTGATTCTATTAATGATAAATTGCTGGGACATTTATATGTGGGTGCTGAACTGTTTGTGAAAAAGGATGAAGGACCATATCCATGCAAAATATTGAAAGTCATCCAGGAGGGAGTTGACAAATGCCGTTATGAGGTAGCGTGGCTCAACAAGGACAAGAATATAACTGAAAACGCTGATGTCTGTGCGGAAGATTTGGTGCAAAAGAAGCCTCTTTTTAGTAGAAATATTTTGAAGTCTTTTATCCGCGAATCCACATATCGGAATGCCCCTTGGGTTTTACACGAAGAACTGGCACAAAAACATGGAATCTCAACTGACATTCCTAAGGAGTTACGAGGAAGAATTTTCATCAAAAATGGAATCTTAACCTGCTCCAAGAAAAGAAAAAATGAGGAATCAATGGTGGAAACTGAAACCAGCAACAAAAGGAAGAAGTTAGATCACTTGGATGGTTCTACCCAAGAGAAAGAAAATGGCCAACACATAGACGAGCCAATCAAATATCCAATTGATGATCTATTGGTGAAGCCTGGCCCAGATGATCCTGTTTTCATTGCTCGTCCTTCTCCTTCGAGAGACTTTAATGTTTCAATGGATTGTGTAGGAGATCTCTTAATGATTTGGGATTTTTGTTCTTCTTTTGCTAAACTGTTGAATTTGTGTCCGTACTCTCTAGAAGACTTTGAAAATGCAATACGCCATAGGGAGAGCAATGTGGTTCTCCTTGTGGAATGTCATGCAGCACTCTTTCGGGTTCTCATCAATGATGACGGAGAATACTCTACATTCTTAAGGAAACAAAGACCAAAGCATAAGATTACAATGATTAATTGGTCAGAGTATTTATCCGATTTTCTGGAAATGATTAATATTCCTGGACTACACCAATTTGAAGCAGCCATTAAACGGGGAAGATATGGCCTTTTAGATGTCAATGCTAAATTGGAAATCCTATCAGAATTGGTTGGTCGAGTCCTTGAAGCAGGAGTTTTCAGGAAAAGAATGGATGAGCTTATTGAACAGCGACAGGCACTTGGAGCCTCTAGAAGGGAAGAAGCACTGGAAGATGGTAGGAAAAGAAGAAAAGAAAAAGAGCAGTTGAAAGCTGAGCCAGAAAGCAATGGAGTTGTGGATGGGCATCATCTGAACAGTGCAAGTGTCTCAACAAAAAATAATCACATTATGCAGAATGGAGACATGGGAGAGAAAAGAAACGGAGAGATCAAACCATCTAGGAATGATACACCGGGTAGAAGTGGGATCAAACATTCAGATCCAGCTTCAAAAAAGATACAGAAGAAGCTGATTTCAGAGCTGGAAGAACCAGCAGAAAATGGTAAAGAAGTATCCAGTAAGAAATTACAGAAACAATTAAAGGATGATAAGGATCCATCAGAGAAGAATAGTGTGGAACAGAGGAGAGCATATTATGAGTGGGAGATGGAGAAACGATTAATTAGTAGAAGCCCATTAGGCAAGGACAGAGATTATAATAGGTATTGGTGGTTCCCCCGTGATTGGAGGATATTTGTTGAAAGTTCTGATTCCAAGGAGTGGGGATACTACGGCAGCAAGGAAGAGGTTGATGCATTGATGGGTTCACTGAATTGCAAGGGTGAGCGGGAAAGGGCACTACAAAACCAATTGGGAAAATGTTATAATAAGCTTCAGAAGAAATCGAAGGATTTGACGCACAAGGTTGAAGCGGATGAGTCTGTGGTTCGAAGGTCTACTCGTGTTCGAGCTCCACCTCAGCAAAACCCCGCCAATGCTTTCCTCAGATATGTTAACAAGTGGAAGGAAGAGTAG 2124 0.4021 MPLLRRKPFTLVEPPKDLKPDELVYQIRFTKEIFRDYHSEYLNHLNLYRQRIWMCKVSGKTSLTYEEALVSEQHATEKVKQFPKELMTPALNIIQYSMLPLKDLADSINDKLLGHLYVGAELFVKKDEGPYPCKILKVIQEGVDKCRYEVAWLNKDKNITENADVCAEDLVQKKPLFSRNILKSFIRESTYRNAPWVLHEELAQKHGISTDIPKELRGRIFIKNGILTCSKKRKNEESMVETETSNKRKKLDHLDGSTQEKENGQHIDEPIKYPIDDLLVKPGPDDPVFIARPSPSRDFNVSMDCVGDLLMIWDFCSSFAKLLNLCPYSLEDFENAIRHRESNVVLLVECHAALFRVLINDDGEYSTFLRKQRPKHKITMINWSEYLSDFLEMINIPGLHQFEAAIKRGRYGLLDVNAKLEILSELVGRVLEAGVFRKRMDELIEQRQALGASRREEALEDGRKRRKEKEQLKAEPESNGVVDGHHLNSASVSTKNNHIMQNGDMGEKRNGEIKPSRNDTPGRSGIKHSDPASKKIQKKLISELEEPAENGKEVSSKKLQKQLKDDKDPSEKNSVEQRRAYYEWEMEKRLISRSPLGKDRDYNRYWWFPRDWRIFVESSDSKEWGYYGSKEEVDALMGSLNCKGERERALQNQLGKCYNKLQKKSKDLTHKVEADESVVRRSTRVRAPPQQNPANAFLRYVNKWKEE 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g0842 707 Coils Coil 455 475 - -
Lal7g0842 707 ProSiteProfiles WAC domain profile. 22 128 IPR013136 -
Lal7g0842 707 ProSiteProfiles DDT domain profile. 303 364 IPR018501 -
Lal7g0842 707 Pfam ATP-utilising chromatin assembly and remodelling N-terminal 24 121 IPR013136 -
Lal7g0842 707 MobiDBLite consensus disorder prediction 452 575 - -
Lal7g0842 707 Pfam DDT domain 304 361 IPR018501 -
Lal7g0842 707 MobiDBLite consensus disorder prediction 505 575 - -
Lal7g0842 707 PANTHER BROMODOMAIN ADJACENT TO ZINC FINGER DOMAIN, 2A 1 705 - -
Lal7g0842 707 Coils Coil 701 707 - -
Lal7g0842 707 MobiDBLite consensus disorder prediction 237 267 - -
Lal7g0842 707 MobiDBLite consensus disorder prediction 452 480 - -
Lal7g0842 707 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 593 656 IPR028941 -
Lal7g0842 707 MobiDBLite consensus disorder prediction 484 503 - -
Lal7g0842 707 SMART testlast3 303 364 IPR018501 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g0842 Lal-Chr7 15029974 15037115 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g0842 401 656 Homeobox Transcription Factor Family AT5G44180 28.253 1.21e-07 53.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Lal7g0842 WAC_Acf1_DNA_bd 8.2e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g0842 - - gmx:100789956 969.148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g0842 7 15029974 15037115 Lal7g0842 7 15029974 15037115 ECH
Lal7g0842 7 15029974 15037115 Lal19g0977 19 13693880 13701777 LSH