Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g0839 ATGTCTGGCTCAAATTTTAGCTGTGATCTTCTGAAAATATTGATGAGGTGGTTGATATTCCTTAGTGTCTTGAGACTCAGTTATGCAATCAAAGAACCTGATGTAGAAGGAGAAGCTCTACTAGATTTTTTGAAGTACCTGAATGATTCCAATAATCAAATAACAGATTGGGATAGTCATTTTGTTAGCCCATGCTATAGTTGGTCTCATGTCACTTGTAGAAATGGACATGTCATATCTCTGACCCTAGCTTCTCATGGATTTTCTGGAACACTGTCTCCCTCAATTGCCAAGTTGAAATACTTGGTTAGCTTGGAATTACAGAACAATAATCTTTCAGGTTTATTACCTGATTACATTTCCAACTTGACAAACCTACAATATCTAAATCTTGCTTACAACAATTTTAAGGGTTCTATACCAGCTACATGGAGTAAACTTTCTAGTCTAAAGCATATGGATCTTTCATCAAATGATCTTACTGGAAGTATCCCAATGCAACTATTTTTAGTTCCAATGTTCAACTTTTCAGATACTCACCTTCATTGTGGAGAGGGCTTTGATAAGCCTTGTGTTTCTAAATCTGAACACCCAGATTCAACCCACAAATCAAAACTTAAAAAAGTTGTGGAATTTGCAAGTTGTGGTGCATTTGCAGTTCTGTGTCTTGGAGCTATTTTTACATATAGGTACCATCAAATGCATAGACACAAAAGTGATGTCTTTGTTGATGTTTCAGGTGAAGATGAGATCAAAATTTCATTTGGACAATTGCGAAGATTTTCTTGGCGTGAACTCCAAGTTGCTACTAAGAATTTCAGTGAAAGCAGTGTAATTGGCCAAGGAGGCTTTGGAAAAGTTTACAGAGGAATACTCTCAGATAATACAAAAGTTGCTGTGAAACGCCTCTCGGATTATAATAACCCTGGTGGAGAGGCGGCATTCGAAAGAGAAGTTCAACTTATAAGTGTTGCAGTTCATAGAAATCTCCTAAGACTCATAGGGTTCTGTACTACTACAACTGAAAGAATCCTTGTATATCCTTTCATGGAAAATCTAAGTGTAGCATACCAATTGAGAGTATTTCTCAATGCTGCTTTAGATTTAAAATCTGATGAGAAAGGTTTGGACTGGCCAACAAGGAAAAAAGTGGCTTTTGGTACTGCACATGGTTTGGAGTATCTACATGAGCAATGTAATCCTAAGATAATACACCGTGATCTAAAGGCTGCAAACATCCTACTAGATGAAGAATTTGAAGCTGTTCTAGGTGATTTTGGGCTAGCCAAGTTGGTTGATACAAGGATGACTCATGTTACCACTCAAGTGCGGGGTACAATGGGTCACATTGCGCCCGAATATTTGTCCACCGGAAAGTCATCAGAAAAGACAGATGTTTTTGGATATGGTATAACACTTCTTGAACTAGTCACAGGTCAGCGTGCAATTGACCTATCTCGCCTTGAAGAAGAGGAGGATGTTCTTCTGATTGATCATGTGAAAAAGCTACTAAGAGAAAATAGGCTAGGGGACATTGTGGATAACAATTTGGAGAGTTATGATCCAAAAGAAGTTGAGACAATTCTTCAAGTTGCATTGCTTTGCACGCAAGGCTTCCCCGAGGATCGGCCGACAATGTCAGAGGTAGTTAAAATGCTGCAAGGAGTTGGTTTGGCAGATAGATGGGTTGATTGGCAGAAACTTGAAGAGACTAGGAATCAAGAATTCTCACACATGACTCATCAATTTGTTTGGAGTGATGAATCTACTTTTGATCAAGAGGCTATACACCTTTCCAAAGCAAGATAG 1809 0.3847 MSGSNFSCDLLKILMRWLIFLSVLRLSYAIKEPDVEGEALLDFLKYLNDSNNQITDWDSHFVSPCYSWSHVTCRNGHVISLTLASHGFSGTLSPSIAKLKYLVSLELQNNNLSGLLPDYISNLTNLQYLNLAYNNFKGSIPATWSKLSSLKHMDLSSNDLTGSIPMQLFLVPMFNFSDTHLHCGEGFDKPCVSKSEHPDSTHKSKLKKVVEFASCGAFAVLCLGAIFTYRYHQMHRHKSDVFVDVSGEDEIKISFGQLRRFSWRELQVATKNFSESSVIGQGGFGKVYRGILSDNTKVAVKRLSDYNNPGGEAAFEREVQLISVAVHRNLLRLIGFCTTTTERILVYPFMENLSVAYQLRVFLNAALDLKSDEKGLDWPTRKKVAFGTAHGLEYLHEQCNPKIIHRDLKAANILLDEEFEAVLGDFGLAKLVDTRMTHVTTQVRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTGQRAIDLSRLEEEEDVLLIDHVKKLLRENRLGDIVDNNLESYDPKEVETILQVALLCTQGFPEDRPTMSEVVKMLQGVGLADRWVDWQKLEETRNQEFSHMTHQFVWSDESTFDQEAIHLSKAR 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g0839 602 Pfam Protein kinase domain 274 551 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal7g0839 602 Pfam Leucine rich repeat 102 160 IPR001611 GO:0005515
Lal7g0839 602 ProSitePatterns Protein kinases ATP-binding region signature. 279 301 IPR017441 GO:0005524
Lal7g0839 602 SUPERFAMILY Protein kinase-like (PK-like) 252 554 IPR011009 -
Lal7g0839 602 Gene3D Ribonuclease Inhibitor 33 192 IPR032675 -
Lal7g0839 602 SUPERFAMILY L domain-like 36 169 - -
Lal7g0839 602 ProSitePatterns Serine/Threonine protein kinases active-site signature. 403 415 IPR008271 GO:0004672|GO:0006468
Lal7g0839 602 Pfam Leucine rich repeat N-terminal domain 35 73 IPR013210 -
Lal7g0839 602 PANTHER LRR RECEPTOR-LIKE KINASE 13 602 - -
Lal7g0839 602 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 13 602 - -
Lal7g0839 602 Coils Coil 598 602 - -
Lal7g0839 602 Gene3D Transferase(Phosphotransferase) domain 1 359 572 - -
Lal7g0839 602 ProSiteProfiles Protein kinase domain profile. 273 563 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal7g0839 602 SMART serkin_6 273 553 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal7g0839 602 Gene3D Phosphorylase Kinase; domain 1 242 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g0839 Lal-Chr7 15012812 15017319 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g0839 33 602 Receptor kinase-like Gene Family AT5G10290 55.760 0.0 649
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Lal7g0839 Pkinase 1.2e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g0839 - - gmx:100800886 1014.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g0839 7 15012812 15017319 Lal7g0839 7 15012812 15017319 ECH
Lal7g0839 7 15012812 15017319 Lal19g0974 19 13668931 13674543 LSH