Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g0837 ATGCAAGGTGAATTAGTGTTACCGCCAGGGTTCAGATTTCACCCCACTGACGATGAGTTGGTGAATCATTACTTGTGTAGAAAATGTGCTTCTCACTCCATTGCTGCTCCTATTATCAAAGAAATTGATTTATATAAGTTTGATCCATGGCAGCTTCCAGGAATGGCTGCTTATGGTGAAAAAGAGTGGTACTTCTTTTCTCCGAGGGATAGAAAATATCCAAACGGTTCACGTCCCAACCGGGCGGCGGGGACTGGGTATTGGAAGGCTACCGGAGCTGACAAGCCGATCGGAAAGCCGAAAACGCTTGGCATAAAAAAGGCCCTTGTTTTCTATGTAGGCAAAGCTCCTGAAGGAGTCAAAACTAATTGGATTATGCATGAATATCGCCTTGCCAATGTTGACAGATCTGCCCACAAGAAAAATAATTTGAGGCTTGATGATTGGGTGTTATGTAGAATTTACAACAAGAAAGGGAAGATTGAGAAATTAAACTGCATGGATCAGAAAGCAGCAGTATCAAATGTTTCAGAGGAAGTTGTTCAGTATGAGAATGAGATGAAGCCAGAGATTAAGAACATGTATGGCCACATTGATTTCAGGAATGACCAATTGCACATTGACACATCAGATTCGAGTCCAATGTGGGATCACGTGGTTTCGCCAGATGTCACTTGTGAGAGTGAGCCAAAGTGGAAAGAACTTGAGCTTGGTCCAACCTTTGATTTTCAGTTGAATGAAATAAACATGCCACCAAATGACCCTTTTGCCCCTCAGTATCAAATGAATTCCCCATTCCATGACATATTAATGTTCTTTCAACAATCATAG 831 0.4188 MQGELVLPPGFRFHPTDDELVNHYLCRKCASHSIAAPIIKEIDLYKFDPWQLPGMAAYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGKPKTLGIKKALVFYVGKAPEGVKTNWIMHEYRLANVDRSAHKKNNLRLDDWVLCRIYNKKGKIEKLNCMDQKAAVSNVSEEVVQYENEMKPEIKNMYGHIDFRNDQLHIDTSDSSPMWDHVVSPDVTCESEPKWKELELGPTFDFQLNEINMPPNDPFAPQYQMNSPFHDILMFFQQS 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g0837 276 Pfam No apical meristem (NAM) protein 8 131 IPR003441 GO:0003677|GO:0006355
Lal7g0837 276 Coils Coil 166 186 - -
Lal7g0837 276 PANTHER BNAC02G00990D PROTEIN 1 242 - -
Lal7g0837 276 PANTHER NAC TRANSCRIPTION FACTOR 56 1 242 - -
Lal7g0837 276 SUPERFAMILY NAC domain 3 157 IPR036093 GO:0003677|GO:0006355
Lal7g0837 276 ProSiteProfiles NAC domain profile. 7 157 IPR003441 GO:0003677|GO:0006355
Lal7g0837 276 Gene3D NAC domain 16 162 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g0837 Lal-Chr7 14986117 14988131 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g0837 1 274 NAC Transcription Factor Family AT5G08790 62.143 3.59e-114 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lal7g0837 NAM 4.9e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g0837 - - gmx:100170751 416.387
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g0837 7 14986117 14988131 Lal7g0837 7 14986117 14988131 ECH
Lal14g1393 14 15239479 15241329 Lal7g0837 7 14986117 14988131 ECH
Lal14g1393 14 15239479 15241329 Lal7g0837 7 14986117 14988131 LSH
Lal7g0837 7 14986117 14988131 Lal19g0964 19 13596933 13599215 LSH