Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g0816 ATGGATACCAACCAGCACACTTCATCATTCACAAATGTTAACAACAACACTTGGAATCTTGAGAAGATGGAAACAAATGAACATGGTGGTATCATTCTCCAAGTTCAAGATCAACACCAAATCCCTATGGCTTCTACAATTTGGCAAAACAACTACCAACATCTTCTTCAAATACCACCATCCTCATCCTCATCAACTATACTAGCCCCTAACTCTTCTTCTTCATCAGGTTTTCTTAGTGACATACTTGGAATCCGCATTGAAGAAGATGAAGAACCGGAAGAGGAGCTTGGAGCCATGAAAGAAATGATGTACAAGATTGCAGCTATGCAACCAGTGGACATAGACCCTGCCACTATTAGGAAGCCAAAGAGAAGAAACGTTAGGATTAGCGACGATCCTCAAAGCGTTGCTGCACGCCACAGGCGAGAGAGGATTAGTGAGAAGATCCGTATCCTCCAGAGACTCGTCCCTGGAGGAACAAAGATGGACACAGCATCCATGCTCGACGAAGCGATTCGCTATGTCAAATTCTTAAAGAGACAAATTAGGTTGCTTCAATCAACTCCTCAAAACCCTCCACAACAACAACCACAGTGCAATGTTGGTGTTGCTTCTACTAGCGCCTTGTTTTTAGCCTCTGGTGGTTGTGATTGGCCTTTTGCACCAAATATGTCACACAGTTCCATCGCTGTCGCGGCCACCATCACCCCCACCACCGCTTCCATGGAAATGCCCGCCCGACTAGGATTCAACACCAGTAGCCATGGACAAGCATATGATGGATCCTCAAGCTTTACTCATCATGAGGTAATTAGTGAATAA 825 0.4485 MDTNQHTSSFTNVNNNTWNLEKMETNEHGGIILQVQDQHQIPMASTIWQNNYQHLLQIPPSSSSSTILAPNSSSSSGFLSDILGIRIEEDEEPEEELGAMKEMMYKIAAMQPVDIDPATIRKPKRRNVRISDDPQSVAARHRRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSTPQNPPQQQPQCNVGVASTSALFLASGGCDWPFAPNMSHSSIAVAATITPTTASMEMPARLGFNTSSHGQAYDGSSSFTHHEVISE 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g0816 274 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 130 179 IPR011598 GO:0046983
Lal7g0816 274 CDD bHLH_AtIND_like 131 188 - -
Lal7g0816 274 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 44 236 IPR045843 GO:0003700|GO:0006355
Lal7g0816 274 SMART finulus 136 185 IPR011598 GO:0046983
Lal7g0816 274 Pfam Helix-loop-helix DNA-binding domain 140 179 IPR011598 GO:0046983
Lal7g0816 274 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 136 198 IPR036638 GO:0046983
Lal7g0816 274 Gene3D - 133 199 IPR036638 GO:0046983
Lal7g0816 274 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 44 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g0816 Lal-Chr7 14880238 14881062 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g0816 97 207 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G09750 82.143 1.05e-48 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lal7g0816 HLH 1.4e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g0816 - - aprc:113856609 346.28