Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g0811 ATGTATGCTTCTACTTCCTTTACTTCACACTTTGTCCATGAACTTCTTGGACACTCTCACTCAAGAAGGTTACTCCTTCAAAATCCACTTAATCAAGCCAATTCCCCCACAACTTCCATTAACATCCACAACTCAACAAATCTATATCTTGGTAGCCGAAATTTCGATGCGAATGTTGTCATAATACTCTTAGTCCTATTGTGTGCTGTTATTTGCTCATTGGGGTTGAATTCTATCATAAGATGTGCCTTTAGGTGTTCAAATTTAGTCATTAATATTGACCCATCATCATCCAACCCTTCACTAAAATTAGCCAACATAGGAATCAAGAACAAAGTGCTTAAGACTTTCCCTATAGTGACCTACTCAGCTGAGATGAACCTTCCAAGTTTGGACACTGAGTGTGTGATATGTCTCTCGGAGTTCGCCAATGACGATAAGGTGCGACTTTTACCAAAGTGCAACCATGTTTTCCATGTTCCTTGCATCGATAAATGGCTTAGTTCACACTCATCTTGCCCCAAGTGTAGGCAATTCCTCATTGATACTTGCCATAAGATTGTTGGATCACAAGCAACTGTGGTGCCATTGCCAGTGCCAGAAACCATTATAAGGATTGAACCACTTGAGCCCGAAGGTTTAGTACATAACTACAGGGAAGCAAACTAA 669 0.4036 MYASTSFTSHFVHELLGHSHSRRLLLQNPLNQANSPTTSINIHNSTNLYLGSRNFDANVVIILLVLLCAVICSLGLNSIIRCAFRCSNLVINIDPSSSNPSLKLANIGIKNKVLKTFPIVTYSAEMNLPSLDTECVICLSEFANDDKVRLLPKCNHVFHVPCIDKWLSSHSSCPKCRQFLIDTCHKIVGSQATVVPLPVPETIIRIEPLEPEGLVHNYREAN 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g0811 222 PANTHER RING-H2 FINGER PROTEIN ATL78 1 221 IPR044602 GO:0016567|GO:0016740
Lal7g0811 222 ProSiteProfiles Zinc finger RING-type profile. 135 177 IPR001841 -
Lal7g0811 222 Pfam Ring finger domain 134 177 IPR001841 -
Lal7g0811 222 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 1 221 - -
Lal7g0811 222 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 98 181 IPR013083 -
Lal7g0811 222 SMART ring_2 135 176 IPR001841 -
Lal7g0811 222 SUPERFAMILY RING/U-box 113 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g0811 Lal-Chr7 14829801 14830469 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g0811 44 214 C3H Transcription Factor Family AT1G76410 43.605 1.09e-39 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g0811 K19040 - gmx:100527126 295.819