Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g0801 ATGGATTTAGATAATTTTCGTTCCATATTGGACAGTGCTAGCGTCGACGTTTGGACATTGATCGACGCTGCACTCACCGTCGCTTCCGTCGACTACGCCGACGAATTCAAACGCCGTAGAGATGGAATCGCCGAGCGCCTTTACAAATCCGCGTCAGCTTCTTCGCCGTGTCGAAATGGTGTACAAAATAACAATACAAAAATCGAGAAACTTCTAGAGGAAGAGTTGAATCCTCATGGAGTGTTGTTTGATGATGAGAACAAGAACAAGAACAATAATATTCTAGAGATTAAGAAACAACTTGAATGCCCTAATCAGTCTGAAGATACGTTGGTGGAGTTGCTACATAATCTTGATCACATTGATATTACGTATGAAGCATTAGAGGGCACTGATATTGGGAGGCATGTGAATAAGTTGCGGAAGCATTCTTCTAATGATGTTAGGAGATTGGTGAAGCTTCTAATCAGAAAGTGGAGAGGAGTTGTAGATGAATGGGTAAAGTCACGAGAAGCAGTTAAAAATGTCATGGTATCTGATGAAGACTCTCCTCAGCAGAAAACCCCACAGAATGGGCTTCATCAGATTCCTGATTTTGTATGCTCAACAAATCCACAAAATGGAAATTCTGGGTCAGAAATAGAACTAAAACCAAAAGCTATTTCTCGCAAAGTGGCTCATCCAAAATCAGCAGCACCTGCACCACTATCACTTCCTACTTCTGCTCCTCAAAATAGACAAAGGGAAAGCAATTCTGACTCTGAAAGACTTGCATCTGCAAGAAAAAGACTCCAGGAGAATTATAAAGAAGCTGCAAATGCTAAAAAGCAGAGAATGATTCAAGTGATGGATCTCCATGAGTTACCTAAACCCAAGAATAAGAATGTGTTCTTTGCAAAGAAACAACAAAGTGTTCATGGA 921 0.4072 MDLDNFRSILDSASVDVWTLIDAALTVASVDYADEFKRRRDGIAERLYKSASASSPCRNGVQNNNTKIEKLLEEELNPHGVLFDDENKNKNNNILEIKKQLECPNQSEDTLVELLHNLDHIDITYEALEGTDIGRHVNKLRKHSSNDVRRLVKLLIRKWRGVVDEWVKSREAVKNVMVSDEDSPQQKTPQNGLHQIPDFVCSTNPQNGNSGSEIELKPKAISRKVAHPKSAAPAPLSLPTSAPQNRQRESNSDSERLASARKRLQENYKEAANAKKQRMIQVMDLHELPKPKNKNVFFAKKQQSVHG 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g0801 307 ProSiteProfiles TFIIS N-terminal domain profile. 95 166 IPR017923 -
Lal7g0801 307 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26C-RELATED 1 304 IPR044790 -
Lal7g0801 307 MobiDBLite consensus disorder prediction 179 213 - -
Lal7g0801 307 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 83 177 IPR035441 -
Lal7g0801 307 Pfam TFIIS helical bundle-like domain 113 162 IPR017923 -
Lal7g0801 307 Coils Coil 254 277 - -
Lal7g0801 307 CDD TFIIS_I 94 164 - -
Lal7g0801 307 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 92 172 IPR035441 -
Lal7g0801 307 MobiDBLite consensus disorder prediction 286 307 - -
Lal7g0801 307 MobiDBLite consensus disorder prediction 176 258 - -
Lal7g0801 307 SMART TFS2_5 94 165 IPR003617 GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g0801 Lal-Chr7 14792722 14794642 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Lal7g0801 Med26 2.5e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g0801 - - aip:107630962 345.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g0801 7 14792722 14794642 Lal19g0926 19 13274483 13276975 LSH
Lal7g0801 7 14792722 14794642 Lal17g0707 17 4996202 5000646 PCT
Lal7g0801 7 14792722 14794642 Lal21g0650 21 4970222 4973481 PCT
Lal7g0801 7 14792722 14794642 Lal4g0610 4 4473640 4476967 PCT
Lal17g0707 17 4996202 5000646 Lal7g0801 7 14792722 14794642 PCT
Lal21g0650 21 4970222 4973481 Lal7g0801 7 14792722 14794642 PCT
Lal4g0610 4 4473640 4476967 Lal7g0801 7 14792722 14794642 PCT