Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g0776 ATGCATGAACACCTAAGTAGTAAAGTAAGCATGAATTCTTCATCTTCATCAGCATTTGTTTCCTCAAGAAGGATGAGTGCATGTGACCCTATTAACCAAATTACTATGTGGGAAGAAAATTTTGTAAATAATGGTACTTTAAGCGCATCCACACCTTTAATTGATGCAGAAACTAAGTTAGATAATCAGTCAGTGGATGCTTCTCATGGAATAGTGAGAACATCTAAGAAGTATGACCAACAAGCTAAAAGGCTTGATGATAAGACAAAAAATGAATTTTACGCGCAGATACAAAGACGTCTCGCTCAAAATAGAGAGGCTGCTCGCAAGAGTCGTTTGAGGAAAAAGGCCTATGTTCAACAATTAGAATCATGCCGTTTGAAGTTGGTGCAGGTAGAGCAAGAATTTGATCATGCAAGACAACAGGGATTATATATTGGTGCTGGAATGTGCTCTAATAATTTGGGTTTTGTTGGCTCTGTAAATTCAGGAATAACAACCTTTGAGATGGAGTATGGACACTGGGTTGAAGAGCAAAATAGACAAATCTTGGAACTTAGAAGTGCCTTAAGTGCTCATATAGGTGACACGGAATTTGGAACACTTGTTGATGGCATCATGAACCACTATTTCAAACTCTTTCGCATGAAGTCTGCGGCTGCAAAAGAAGACGTTTTCTATGTCATGTCAGGCGTGTGGGAAACAACAGTCGAACGATTTTTCATATGGCTCGGAGGCTTTCGTCCCTCTGAAGTTCTAAAGGTTCTGATCCCTCTGATCGAGCCCTTGACGGAGCAACAACGGGGTGGTGTCTGTAACCTTATAAAATCATGTCATCAAGCAGAAGATGCCCTTTCAAAAGGTATGGACAAACTGGAGCAAATACTCGCTGAAACTGTCACAGACGGACAACTCGACGAAGAAGCTTACATTCCACAAATGGTTGCTGCAATGGAAAGGTTTGAGTCTCTTGTGAGATTTGTGAACCAGGCTGATCATCTAAGGCAGGAAACATTGCAGCAAATGTCAAGAGTACTTACCTTCCGTCAGTGTGCTCGATGGCTGCTTGTTTTCGGGGAATATTTCCAACGCCTTCGAACATTGAGCTCGCTATGGGCTAATTGTCCTCGTCAGACAACTGATTAG 1146 0.4162 MHEHLSSKVSMNSSSSSAFVSSRRMSACDPINQITMWEENFVNNGTLSASTPLIDAETKLDNQSVDASHGIVRTSKKYDQQAKRLDDKTKNEFYAQIQRRLAQNREAARKSRLRKKAYVQQLESCRLKLVQVEQEFDHARQQGLYIGAGMCSNNLGFVGSVNSGITTFEMEYGHWVEEQNRQILELRSALSAHIGDTEFGTLVDGIMNHYFKLFRMKSAAAKEDVFYVMSGVWETTVERFFIWLGGFRPSEVLKVLIPLIEPLTEQQRGGVCNLIKSCHQAEDALSKGMDKLEQILAETVTDGQLDEEAYIPQMVAAMERFESLVRFVNQADHLRQETLQQMSRVLTFRQCARWLLVFGEYFQRLRTLSSLWANCPRQTTD 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g0776 381 SUPERFAMILY Leucine zipper domain 97 126 IPR046347 GO:0003700|GO:0006355
Lal7g0776 381 Pfam bZIP transcription factor 97 124 IPR004827 GO:0003700|GO:0006355
Lal7g0776 381 Coils Coil 115 142 - -
Lal7g0776 381 ProSiteProfiles DOG1 domain profile. 165 375 IPR025422 GO:0006351|GO:0043565
Lal7g0776 381 PANTHER BZIP FAMILY TRANSCRIPTION FACTOR 12 379 - -
Lal7g0776 381 Pfam Seed dormancy control 183 257 IPR025422 GO:0006351|GO:0043565
Lal7g0776 381 PANTHER TRANSCRIPTION FACTOR TGA9 12 379 - -
Lal7g0776 381 SMART brlzneu 92 156 IPR004827 GO:0003700|GO:0006355
Lal7g0776 381 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 99 114 IPR004827 GO:0003700|GO:0006355
Lal7g0776 381 Gene3D - 96 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g0776 Lal-Chr7 14565200 14569626 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g0776 11 380 Calmodulin-binding Proteins AT5G10030 61.394 1.67e-162 458
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lal7g0776 DOG1 2.5e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g0776 K14431 - gmx:100780003 501.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g0776 7 14565200 14569626 Lal7g0776 7 14565200 14569626 ECH
Lal7g0776 7 14565200 14569626 Lal17g1609 17 17460949 17466932 PCT