Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g0775 ATGTATATAGCATGCCCTAAAAGAGAAAGGATAAAAGAGTATTTTAAATCATATACAAAACCAATTGCCACCAAAACCCAATACCACAGATTCATTGAAGAGAAGAACCCCACAATTTGTTTCACAAGAAGATTGAGGCCAGATCACATAGAATGCATGGTGTGCTTAACTGAGTTTGAAGAAGGGGAGAAAGTGAGGAAGTTGGAATGCAAACACACATTTCACAAGGAATGTTTGGATAAGTGGTTGCACCAATATTGTGCTACATGTCCACTCTGCAGGAAAAAAGTGTTGCCAGATGATGTTATGATCAAGTATCATCAAGTTCAGCTTCAAAATGATGTAGGGTATCATGAAGGGAATGATGACCTACTTATGTCTTTGTTATCTGCATTAAGAGGTGCTAGTATCGAACAAGGATCTATTGTTCCAGACTATGTCTCAAACCATGTCCTGGACCAATGA 465 0.3828 MYIACPKRERIKEYFKSYTKPIATKTQYHRFIEEKNPTICFTRRLRPDHIECMVCLTEFEEGEKVRKLECKHTFHKECLDKWLHQYCATCPLCRKKVLPDDVMIKYHQVQLQNDVGYHEGNDDLLMSLLSALRGASIEQGSIVPDYVSNHVLDQ 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g0775 154 CDD RING-H2_PA-TM-RING 51 94 - -
Lal7g0775 154 SMART ring_2 52 93 IPR001841 -
Lal7g0775 154 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 19 135 - -
Lal7g0775 154 Pfam Ring finger domain 51 94 IPR001841 -
Lal7g0775 154 ProSiteProfiles Zinc finger RING-type profile. 52 94 IPR001841 -
Lal7g0775 154 SUPERFAMILY RING/U-box 28 100 - -
Lal7g0775 154 PANTHER - 19 135 - -
Lal7g0775 154 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 12 99 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g0775 Lal-Chr7 14558495 14559175 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g0775 51 108 C3H Transcription Factor Family AT1G15100 55.172 1.45e-20 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g0775 K16282 - gmx:102661133 172.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g0775 7 14558495 14559175 Lal7g0775 7 14558495 14559175 ECH
Lal14g1339 14 14881468 14882092 Lal7g0775 7 14558495 14559175 LSH