Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g0741 ATGTTGGGTGAAGAAGAGGGTAAGGACTCTGCCGGTGGTGGTCATCGGAGAACATATTCCCGGTCAGTTTCATGGACTGATCGAGCTCCGGCGACCCGAAAGCCGCATAACAAGCCGAGGTCATTGCTGGCATCACTTCAGCCTTTATCAATTAACAGAAGCAGTGTTCAGGAGTGGCCAAGTGCTGGATCTGATGATCTTGGAGTTTGGCCACTTCCTCAGACTCCAAGAGGGTCAATCAGATCCACTGAATTGGGTGCTATGAATGAGTTTCAGTTCAATAGGGATAAACTTGCCTTCTATGACAAAGAGTGTTCTAGAATTGTTGACCATGTGTACCTTGGAAGTGACACAGTTGCAAAGAGTCATGAGCTTTTGAAGCAGAACGGGATTACTCATGTTCTTAACTGTGTTGGTTTTGTTTGCCCTGAATATTTCAAGAGTGATTTTGTGTATAAAACTCTTTGTTTGAAGGATAGTCCAACTGAGGACATTACTAGTATTCTGTATGATGTTTTTGATTACTTTGAGGATGTTAGGGAGCAAGGTGGGCGTGTCTTTGTTCATTGCTGCCGAGGGGTTTCGAGATCAACGTCGTTGGTGATTGCATATATCATGTGGAGGGAGAGTCTGAGCTTTGAAGATGCTTTTCAGTATGTGAAGAATGCAAGAGGTGTTACCAATCCAAACATGGGTTTTGCTAGTCAACTCCTTCAGTGTCAGAAAAGGGTACATGCTATGTCTGCTAGTCCTAATTCTATTATTAGAATGTATAGAATGGCTCCTCATTCACCTTATGACCCTCTTCATTTGGTTCCCAAAATGGTGAACCACCCATGTGCACAAGAACTTGATTCCCGTGGCGCTTTTATCATCCATGTTCCTTCTGCTATATATGTCTGGACTGGTAAGAATTGTAATTGTGTCATGTCTTGTAATGCAAAATCGGCAGCCGGACAGGTCATACGTTATGAGAGGGCCAGAGGTCCAGTTCTTATGATCCATGAAGACGAGGAGCCACCAGATTTTTGGATTGCTCTTTCCAATGAGCAATTGTTATCAGGTAATTGTGATAAGGTTGAGGTCAAGAAGGATACAACATTGGCTTCTTCTGAAAAGATGGAGATTGATGATGCAGTCGATAATTGGATTCGTCCGAGGAAAGTAGATGAGTATGATTTGGATTTTGAGATTTTTCACAAGGCACTTGCTGGTGGTGTTGTTCCACCTTTTTCCATATCTTATGCTGAATCAGAAACTTGCCTTCCCGCTAGGGAAAACGGTTGGGGAAGATTGAGGAGAAAGCTTGCTAGCGGTCTCATGAAAGGATTGTTCCCATCCTGCAAAAACACAAACTCATCCAAAGACGAGTCGGGCTTGATTATGGAAGAAGAAGAAGAAGAAGAAGAAAAACAACACTTTGTTGTTGATCCTTCATCACCATCATCAAACCGTCCTTGTGGTTCACCGGATTCGTTTGAGTGTTTTCCAGATAACAGCTCGGACAGGGAAAAAGATACACTTGAAGTCATGGACCACTTTGTTCCTAGTGTTGATTCATCGCTGCCACCATCACCTGGAGGAATGTCAGATTCTAATGCTTGTTTTCTAAGCAATAGCCCAAAACTCAGTTCCAAGTCACCAACGCTTTCACCTTCAAGTTCTGATTATGCTAGCTCATTCACATTTTCACCTTCATCAACAAACTGGTCTTCTCGGTTGCCATCACCTTCTAGCCTAGAATCAACTGAAGCCTTTTATGGTAAAGATGCATCTTTCTTAGATAGTTTCTTTTCACTTCAGAAAGAAACCGTCTCTTCACCTTCAGAGGCATATTCGGCTAACCACTCATTTGGAAGAGAAGACTTCTATTTGCGGAGTAAAGGATCTTCGCCCTCCATTGCAGAGCGCAGAGGGAGCAATCTGCCACCTCACATGGTGCTATCCTCGGTCAATGAATCACCCTGCGACCACAAGGCCCCGATAAGGTCACAGTCGTTCTCTCTACCTGATTTCGATGATAATTTGAGTAAGGATGTTAGTTCCAACTTCGAAGCAATCTGA 2064 0.4341 MLGEEEGKDSAGGGHRRTYSRSVSWTDRAPATRKPHNKPRSLLASLQPLSINRSSVQEWPSAGSDDLGVWPLPQTPRGSIRSTELGAMNEFQFNRDKLAFYDKECSRIVDHVYLGSDTVAKSHELLKQNGITHVLNCVGFVCPEYFKSDFVYKTLCLKDSPTEDITSILYDVFDYFEDVREQGGRVFVHCCRGVSRSTSLVIAYIMWRESLSFEDAFQYVKNARGVTNPNMGFASQLLQCQKRVHAMSASPNSIIRMYRMAPHSPYDPLHLVPKMVNHPCAQELDSRGAFIIHVPSAIYVWTGKNCNCVMSCNAKSAAGQVIRYERARGPVLMIHEDEEPPDFWIALSNEQLLSGNCDKVEVKKDTTLASSEKMEIDDAVDNWIRPRKVDEYDLDFEIFHKALAGGVVPPFSISYAESETCLPARENGWGRLRRKLASGLMKGLFPSCKNTNSSKDESGLIMEEEEEEEEKQHFVVDPSSPSSNRPCGSPDSFECFPDNSSDREKDTLEVMDHFVPSVDSSLPPSPGGMSDSNACFLSNSPKLSSKSPTLSPSSSDYASSFTFSPSSTNWSSRLPSPSSLESTEAFYGKDASFLDSFFSLQKETVSSPSEAYSANHSFGREDFYLRSKGSSPSIAERRGSNLPPHMVLSSVNESPCDHKAPIRSQSFSLPDFDDNLSKDVSSNFEAI 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g0741 687 CDD DSP 105 239 - -
Lal7g0741 687 MobiDBLite consensus disorder prediction 668 687 - -
Lal7g0741 687 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 163 224 IPR000387 GO:0016311|GO:0016791
Lal7g0741 687 MobiDBLite consensus disorder prediction 1 15 - -
Lal7g0741 687 MobiDBLite consensus disorder prediction 1 42 - -
Lal7g0741 687 MobiDBLite consensus disorder prediction 448 502 - -
Lal7g0741 687 PANTHER MKPA PROTEIN 3 648 - -
Lal7g0741 687 ProSitePatterns Tyrosine specific protein phosphatases active site. 188 198 IPR016130 GO:0016311|GO:0016791
Lal7g0741 687 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 96 247 IPR029021 -
Lal7g0741 687 Gene3D Protein tyrosine phosphatase superfamily 77 246 IPR029021 -
Lal7g0741 687 SMART dsp_5 104 243 IPR020422 GO:0006470|GO:0008138
Lal7g0741 687 SUPERFAMILY Actin depolymerizing proteins 251 349 - -
Lal7g0741 687 MobiDBLite consensus disorder prediction 629 687 - -
Lal7g0741 687 PANTHER PROTEIN-TYROSINE-PHOSPHATASE MKP1 3 648 - -
Lal7g0741 687 Pfam Dual specificity phosphatase, catalytic domain 112 242 IPR000340 GO:0008138|GO:0016311
Lal7g0741 687 Gene3D Severin 255 353 IPR029006 -
Lal7g0741 687 ProSiteProfiles Dual specificity protein phosphatase domain profile. 104 246 IPR020422 GO:0006470|GO:0008138
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g0741 Lal-Chr7 14313027 14315090 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g0741 1 140 Protein tyrosine phosphatase (PTP) family AT3G55270 39.459 1.97e-28 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g0741 - - lja:Lj6g3v0574850.1 821.617