Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g0728 ATGCGTAAGGTTACCTTCTCATCTCGCCGCCATGTCCCCCGCCGCCGCCACAAGAAGTCGACGAGATCATCTCAGTTGTCGGAATCGACGCCACCGTCGATAAATGGTTCATCGCACGAGAGCCTCGTGAATGAATTGAAGGCGAAGAAAATGTCCGGCTTAATGAGGTTGTGGATGCGGGTTGACCAAGAGGGAAGGACAGAGATGGTGGAATGGGATAAGAACACGATCATTCACCATGCTTCGATTCCTGCTAGGGATTTGAGGATTTTGGGCCCTGTCTATTCTCACTCCTCTAATATCCTCGACAACAACTTCCATATAAAACTCAACCTAAGCTTCATGGACCTGCATATGAACGAGAACTTGAAATGCAAGTTTCTAATGAATTACAATGGTTATCTTCTCCAAAATTCGATGTTTCAAGTTTTGGAGATTGCTTTGGAATTTGTTTGTACTCTTCTTGACTCAAATGTTGCAGAACTTGAAAGTGATGCTTACCCTGTACTACATGAATTGGCTAAGAATGTTAGCACCAATAATCTTGACTTTGTTCGAAGTTTGAAGAGCAACCTTACACGTTTTCTGGCACGTGTGCAAAAGGTGCGGGATGAAATTGAACATTTATTAGATGACAATGAAAATATGCGTCGATTATATTTGAGCAGGAATGGGTTGGTGAATCATCAAATTGAAGCCCATTCTACCAAAAGTGAAAGTCCTGTGTCTAGAAACGATTATAATGATGTAGAGGAACTGGAGATGTTGTTGGAGGCATATTTTATGCAGTTGGATTCAACTCGTAACAAGATACTCTCTGTAAGTGTTCATTCACCACTTTCTTCTAAACTCATGTCTGTGTTCAACTTTGATGATTATTGA 882 0.415 MRKVTFSSRRHVPRRRHKKSTRSSQLSESTPPSINGSSHESLVNELKAKKMSGLMRLWMRVDQEGRTEMVEWDKNTIIHHASIPARDLRILGPVYSHSSNILDNNFHIKLNLSFMDLHMNENLKCKFLMNYNGYLLQNSMFQVLEIALEFVCTLLDSNVAELESDAYPVLHELAKNVSTNNLDFVRSLKSNLTRFLARVQKVRDEIEHLLDDNENMRRLYLSRNGLVNHQIEAHSTKSESPVSRNDYNDVEELEMLLEAYFMQLDSTRNKILSVSVHSPLSSKLMSVFNFDDY 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g0728 293 Coils Coil 250 270 - -
Lal7g0728 293 Gene3D Magnesium transport protein CorA, transmembrane region 130 278 - -
Lal7g0728 293 MobiDBLite consensus disorder prediction 24 39 - -
Lal7g0728 293 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 244 275 IPR039204 -
Lal7g0728 293 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 141 238 IPR039204 -
Lal7g0728 293 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 8 115 IPR039204 -
Lal7g0728 293 MobiDBLite consensus disorder prediction 1 21 - -
Lal7g0728 293 Coils Coil 185 219 - -
Lal7g0728 293 PANTHER MAGNESIUM TRANSPORTER MRS2-4-RELATED 141 238 - -
Lal7g0728 293 PANTHER MAGNESIUM TRANSPORTER MRS2-4-RELATED 8 115 - -
Lal7g0728 293 PANTHER MAGNESIUM TRANSPORTER MRS2-4-RELATED 244 275 - -
Lal7g0728 293 MobiDBLite consensus disorder prediction 1 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g0728 Lal-Chr7 14198689 14203070 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g0728 47 274 MRS2 Gene Family AT3G58970 50.000 6.42e-77 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g0728 K16075 - cit:102630717 242.276
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1260 14 14391425 14395353 Lal7g0728 7 14198689 14203070 LSH
Lal7g0728 7 14198689 14203070 Lal4g1638 4 20489672 20492607 PCT