Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g0727 ATGGCATATTCAAAGGGCTCGTCGGGTGTCAGAAATTTCATGTATCCTGGAAAGCATCCTCTTCTCCCTCCTAAAAGTCCGTTTCCGAGTGTTTCACAAGCATATGCTGATTATGTCCCAAGTTCTGCAGTCGGTTCAAAGGCTGTACAAAAACCTAGAGAGGGAAACACACACCACCAACGTACTTCTTCTGAGAGCCATGTTATGGAGGAGCAGCCTTCGTGGCTTGATGATCTCCTTAATGAGCCAGAGACACCTGTGCGAAGGGGTGGTCATCGGCGTTCATCAAGTGATTCTTCTTTTGCATACTTAGATACAGTTAATGCGACTAATGTCAATTTTGCTGATCAGAATCTGCTATCTGTTACATCTTGGTCATCTCAAGAATTTGATCACGGCAAAGACGCTCGTCATATACCCACGTATGCAGAGATGAATGCAGCAAGACAGAGAAATAGGTCATGGGACTCATTTTCAAATGCCTTGGCTCATCCAGGTGTTGCTCCCTCTAGCAAAGAAAATGTTGTTTTGAAGAGTTCAGGACCACCATATGCATCACATGAAACAGATGGGCTTCCATCAACTGCAAATGAAAAGTATGATTCAGTACAATCTGGAATACAGGATACAAAATCATCTTCGGAGCGAAAGGATGGCTCACATTCCAAGTCGTCTGCTTCTGAGACAGATACAAAACGTGCTAAACAGCAATTTGCCCAACGTTCACGGGTCCGTAAACTTCAGTACATAGCTGAGCTGGAAAGAAATGTACAAGCTTTACAGGCAGAAGGGTCTGAAGTGTCAGCTGAACTAGAATTTCTTAACCAGCAGAATCTTATCCTGAGTATGGAGAATAAAGCACTCAAGCAACGTTTAGAAAGTTTGGCACAGGAGCAGCTTATCAAATATCTGGAACAGGAAGTACTGGAAAGAGAGATTGCAAGATTGCGCACATTGTTTCAGCAGCAGAAGACACATCAGCCGCAACAACCATCAACTAGTCATAGGCGCACCAACAGCAGAGACCTCGAATCTCAGTTTGCAAACATTTCTCTAAAACACAAGGACACCAATTCAGGGCATGACACCAATTCAGGGCATGACCCTGCGACTGGAGCATTCAGAATTTAG 1131 0.4412 MAYSKGSSGVRNFMYPGKHPLLPPKSPFPSVSQAYADYVPSSAVGSKAVQKPREGNTHHQRTSSESHVMEEQPSWLDDLLNEPETPVRRGGHRRSSSDSSFAYLDTVNATNVNFADQNLLSVTSWSSQEFDHGKDARHIPTYAEMNAARQRNRSWDSFSNALAHPGVAPSSKENVVLKSSGPPYASHETDGLPSTANEKYDSVQSGIQDTKSSSERKDGSHSKSSASETDTKRAKQQFAQRSRVRKLQYIAELERNVQALQAEGSEVSAELEFLNQQNLILSMENKALKQRLESLAQEQLIKYLEQEVLEREIARLRTLFQQQKTHQPQQPSTSHRRTNSRDLESQFANISLKHKDTNSGHDTNSGHDPATGAFRI 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g0727 376 Coils Coil 243 298 - -
Lal7g0727 376 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN-RELATED 1 358 IPR044797 -
Lal7g0727 376 MobiDBLite consensus disorder prediction 321 341 - -
Lal7g0727 376 MobiDBLite consensus disorder prediction 42 72 - -
Lal7g0727 376 Gene3D - 232 284 - -
Lal7g0727 376 MobiDBLite consensus disorder prediction 165 239 - -
Lal7g0727 376 MobiDBLite consensus disorder prediction 353 376 - -
Lal7g0727 376 MobiDBLite consensus disorder prediction 52 66 - -
Lal7g0727 376 SMART brlzneu 228 287 IPR004827 GO:0003700|GO:0006355
Lal7g0727 376 MobiDBLite consensus disorder prediction 211 237 - -
Lal7g0727 376 CDD bZIP_plant_RF2 230 278 IPR044759 GO:0003700|GO:0006355
Lal7g0727 376 MobiDBLite consensus disorder prediction 321 336 - -
Lal7g0727 376 MobiDBLite consensus disorder prediction 190 210 - -
Lal7g0727 376 PANTHER - 1 358 - -
Lal7g0727 376 SUPERFAMILY Leucine zipper domain 239 281 IPR046347 GO:0003700|GO:0006355
Lal7g0727 376 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g0727 Lal-Chr7 14191818 14196556 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g0727 22 302 bZIP Transcription Factor Family AT2G42380 29.966 2.33e-21 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g0727 - - gmx:100813098 541.576
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1259 14 14385006 14390085 Lal7g0727 7 14191818 14196556 LSH
Lal7g0727 7 14191818 14196556 Lal19g0818 19 12236640 12241036 LSH