Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g0718 ATGTTTGTTCTGATTCCAGATTTAGGCACGGTGTTGCATCTGATTCCGGAAATCATGACCTCTGCTCATGACCTAACTGAAGTATTATCTGAACTTGTGCAACAAAATGTTTATCCAGATAATGAGGCTGACAGGCAGCAGCAGTCAGAATCACAGATGCACCCTTCATTTGAAAATGGAATTTCTGATCCTGGTCTTAGTACCCAGAATGTTCAGTATGCAATACCTGCACAGCTTGGAACTGGGCATGCTATGGCACCGCCTGTGTACCCATATCAAGATCCTTACTATAGAAGCATCTTTGCCCCTTATGCTACACAACCTTATCCCCCACCACCCTATGGTGGACAGCCAATGGTCCAACTTCAGTTAATGGGAATGCAACAAGCTGGTGTTCCTCTCCCCACTGATGCAGTTGAGGAGCCTGTGTTTGTCAATGCAAAGCAATATCATGGTATATTAAGACGTAGACAATCCCGTGCCAAAGCTGAATCAGAAAATAAAGCTATACGGAATCGGAAGCCGTACTTGCATGAATCTCGGCATTTGCATGCACTGAAAAGAGCAAGAGGATGTGGAGGTCGGTTTCTGAATTCAAAGAAAAATAATAACCAACATAATGGTGAGGCATCACCAGACGAATCGGAATCACAGCCCAATGTCAATCTCAGCTCTGATAAAAGTGATCTTGTTTCGGCAGGTAGGAATCCTAAAACTACAGAATGA 726 0.438 MFVLIPDLGTVLHLIPEIMTSAHDLTEVLSELVQQNVYPDNEADRQQQSESQMHPSFENGISDPGLSTQNVQYAIPAQLGTGHAMAPPVYPYQDPYYRSIFAPYATQPYPPPPYGGQPMVQLQLMGMQQAGVPLPTDAVEEPVFVNAKQYHGILRRRQSRAKAESENKAIRNRKPYLHESRHLHALKRARGCGGRFLNSKKNNNQHNGEASPDESESQPNVNLSSDKSDLVSAGRNPKTTE 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g0718 241 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT A-7 21 215 - -
Lal7g0718 241 MobiDBLite consensus disorder prediction 157 176 - -
Lal7g0718 241 ProSiteProfiles NF-YA/HAP2 family profile. 139 199 IPR001289 GO:0003700|GO:0006355
Lal7g0718 241 SMART cbf3 138 199 IPR001289 GO:0003700|GO:0006355
Lal7g0718 241 PANTHER TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED 21 215 IPR001289 GO:0003700|GO:0006355
Lal7g0718 241 MobiDBLite consensus disorder prediction 197 241 - -
Lal7g0718 241 MobiDBLite consensus disorder prediction 42 65 - -
Lal7g0718 241 Pfam CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 141 196 IPR001289 GO:0003700|GO:0006355
Lal7g0718 241 ProSitePatterns NF-YA/HAP2 subunit signature. 144 164 IPR018362 GO:0003677|GO:0016602
Lal7g0718 241 MobiDBLite consensus disorder prediction 155 241 - -
Lal7g0718 241 PRINTS CCAAT-binding transcription factor subunit B signature 142 164 IPR001289 GO:0003700|GO:0006355
Lal7g0718 241 PRINTS CCAAT-binding transcription factor subunit B signature 173 196 IPR001289 GO:0003700|GO:0006355
Lal7g0718 241 Gene3D - 139 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g0718 Lal-Chr7 14109750 14114535 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g0718 44 233 CCAAT-HAP2 Transcription Factor Family AT1G30500 55.789 5.52e-64 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YA Lal7g0718 CBFB_NFYA 9.2e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g0718 K08064 - gmx:100784325 296.589