Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g0689 ATGGATCAGGTAAGAAGCAAAGGTAGTAGTGAGGTTATTGATCATGTTGATGAAGGAGTAGATGAGAATTTGAGCCATTTAATTGAAGGAGTTGTTACAGATGATGCTGTAGATGGAGGTAAATTAGGTGAAAGAGATAGTGTAATAAGTGGTGAAGATAGAACTTCAGAAAAGATGTGCAATGATTCAAGATTGAATAATGAGGTAAAAGAGGAAGAGGGGTCTCAAGAAGTTAAGGTTGAGATGTGTTATCAGCAAAAATACAATGATAAATTGCATGTGGTTGATCAAGGAAGTAGTTGTAATTCAAGAAATTTGGTTAATAGGGAAGTACTTGACCCATGTGTTGTAATAGATTCTTCTTCTCAGATTGAGAATTTCAATGGAGATAATATGAAATTGGAGGCAGAAGTTAATGAATCAGGGTTGAGTAAGGTATCTATGAAAGCACTAAAAGGGGTGGTGTCTGAGACAGATAAAAGTTCATGCGCAATTGATGTAAAATGTGGCAGCTACAAAGCGTTTAGCGAGACTTTTGAAGGTGAAATGATTTGTAGGATTTGTCATCTGGCTTCTGGGCAACCATTAGAAGCTACAGATACTGGAACAACTAATAGTGCTACTAGTACGGATTTGATTCAGCTTGGTTGTGCATGTAAAGATGAGCTAGGCATTGCACATAGTCATTGTGCCGAGGCATGGTTCAAGCTTAGAGGGAACAGCATCCTTATAGATGTAGCATTAGGTGAGACCAGGAACTTAGCTCTACATCTAGTGGAGAACGGCCACTATCATGACCATACCCCGAAAAATGGAGTTTCTATTGGTAATGGACTTCAGTGA 843 0.3855 MDQVRSKGSSEVIDHVDEGVDENLSHLIEGVVTDDAVDGGKLGERDSVISGEDRTSEKMCNDSRLNNEVKEEEGSQEVKVEMCYQQKYNDKLHVVDQGSSCNSRNLVNREVLDPCVVIDSSSQIENFNGDNMKLEAEVNESGLSKVSMKALKGVVSETDKSSCAIDVKCGSYKAFSETFEGEMICRICHLASGQPLEATDTGTTNSATSTDLIQLGCACKDELGIAHSHCAEAWFKLRGNSILIDVALGETRNLALHLVENGHYHDHTPKNGVSIGNGLQ 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g0689 280 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 179 245 IPR013083 -
Lal7g0689 280 PANTHER ZINC FINGER, RING-CH-TYPE 1 244 - -
Lal7g0689 280 ProSiteProfiles Zinc finger RING-CH-type profile. 177 254 IPR011016 GO:0008270
Lal7g0689 280 SMART ringv_2 184 241 IPR011016 GO:0008270
Lal7g0689 280 PANTHER E3 UBIQUITIN-PROTEIN LIGASE MARCH-RELATED 1 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g0689 Lal-Chr7 13885202 13888808 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g0689 162 242 C3H Transcription Factor Family AT5G05830 38.272 9.45e-11 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g0689 - - gmx:100791129 297.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g0689 7 13885202 13888808 Lal3g0411 3 2853690 2856510 PCT
Lal7g0689 7 13885202 13888808 Lal11g0548 11 4401943 4404323 PCT
Lal3g0411 3 2853690 2856510 Lal7g0689 7 13885202 13888808 PCT
Lal11g0548 11 4401943 4404323 Lal7g0689 7 13885202 13888808 PCT