Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g0686 ATGTCAGAAGGATATAATGAGATTCAACACAATGAGAGGAGTGAAGAACATGGTGAGGATACTTCATTGGGGTCTTCATCACAGAAATGCTCATCATTTGACTTGAATGAAGAAGCTACTAGTGAACATAATAATGATAATGAAGAGGCATGTGAACTAAGAGTTGATGAGGAAAATGATGAGAAAGTAAAAGATGATGTAGGGATTTCAACTAGTAGAAGTCTCACAAGTTCAAAAGAATTGGAGAATGAAGAAAGAAGAGGTGGTGTGAGACAATATGTTAGATCAAAAATGCCTAGGCTTCGTTGGACTCCTGATCTTCATCTCTCCTTTGTGCATGCGGTTGAAAGGCTTGGTGGTCAAGAGAGAGCAACACCCAAGTTGGTGCTTCAGCTAATGAATGTGAGAGGTCTAAGCATTGCTCATGTCAAGAGTCATTTGCAGATGTACCGAAGCAAGAAGCTTGACGAGACTGGGCAAGTACTAAGTCAATATAGATCAACCCATGATCGCTTAAGTTGTATTTCGCATATACCTCATCAATCATTGAGTCCTCATCAACATTTCAAGATGGGAAATGGTGGAATCATTTTAGCAACTCACTCCAATGAACATAGCAATTTCCAAAGTCTCCTTCACCCATCTTTCTCAATATCACATTTAAAGGTTACCCATGCCAGGCACCAGCAATGGTACTTCAATAATCTTGAACCTTTTAGAACACCAAATTACATAAGCAATGAAGTTATTCCCTCAACAAGCTTACAAATTCAAGCAAGACCTATAGTTTCAAACCAAATTCAACTAATGGATACTGGAACCAGAATTGCACCCATGAGACCAAGCCAATTTCATGAAGAAAAAAGGTGGCCACCATTACAAATTATGAACAACAATACTGAGTGGAAGAAAATGTTGTCTACAACATCTAATTCTGTGTCACAATCTGTTGTACAACAATTTGAAGCTTCTATTTCATCTCTTAGACCATCTGATCAATTAAGCATTGGAAACAACACAAGAATCAAGGATCATCTATCAAACTCTGATGAACCTTTCAATTATTCCACTTGCTTGAAGCTTGGATTTGATCCTCCATTTCGGATTAAGTTGAATCAAGAAAAGCTTCAGAGAGATAAGCAATTATTGGTGCCAGATTTGCAACTGGGTTTGAGTAAAAAGGATGGCAAAGATGATCATTGCAGAGAAACCCCAGAAATCAGCACCAAACTTTCACTTTCTTAG 1245 0.3807 MSEGYNEIQHNERSEEHGEDTSLGSSSQKCSSFDLNEEATSEHNNDNEEACELRVDEENDEKVKDDVGISTSRSLTSSKELENEERRGGVRQYVRSKMPRLRWTPDLHLSFVHAVERLGGQERATPKLVLQLMNVRGLSIAHVKSHLQMYRSKKLDETGQVLSQYRSTHDRLSCISHIPHQSLSPHQHFKMGNGGIILATHSNEHSNFQSLLHPSFSISHLKVTHARHQQWYFNNLEPFRTPNYISNEVIPSTSLQIQARPIVSNQIQLMDTGTRIAPMRPSQFHEEKRWPPLQIMNNNTEWKKMLSTTSNSVSQSVVQQFEASISSLRPSDQLSIGNNTRIKDHLSNSDEPFNYSTCLKLGFDPPFRIKLNQEKLQRDKQLLVPDLQLGLSKKDGKDDHCRETPEISTKLSLS 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g0686 414 MobiDBLite consensus disorder prediction 1 88 - -
Lal7g0686 414 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 95 155 IPR017930 -
Lal7g0686 414 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 99 154 IPR006447 GO:0003677
Lal7g0686 414 MobiDBLite consensus disorder prediction 39 68 - -
Lal7g0686 414 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 11 414 IPR044848 GO:0003700
Lal7g0686 414 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 11 414 - -
Lal7g0686 414 Gene3D - 98 155 - -
Lal7g0686 414 MobiDBLite consensus disorder prediction 23 38 - -
Lal7g0686 414 SUPERFAMILY Homeodomain-like 97 153 IPR009057 -
Lal7g0686 414 MobiDBLite consensus disorder prediction 1 22 - -
Lal7g0686 414 Pfam Myb-like DNA-binding domain 101 151 IPR001005 -
Lal7g0686 414 MobiDBLite consensus disorder prediction 393 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g0686 Lal-Chr7 13842243 13847516 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g0686 25 183 G2-like Transcription Factor Family AT2G42660 48.485 3.02e-35 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lal7g0686 Myb_DNA-binding 1.1e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g0686 - - gmx:100808625 490.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g0686 7 13842243 13847516 Lal7g0686 7 13842243 13847516 ECH
Lal7g0686 7 13842243 13847516 Lal19g0761 19 11684438 11694547 ECH
Lal7g0686 7 13842243 13847516 Lal19g0761 19 11684438 11694547 LSH