Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g0680 ATGCATAGCATGGCTTCTTCTCCTAGTTGCATGCATTCAAGTTCTCTTCATAACCCTGGCCCTAGTTCTGAGGAAGATCATCAACATCAGCATCAGCATCATGTCATGGATCAAAAGAAAAGGAAGAGAATGGTGTCAAATAGAGAATCAGCAAAGAGATCAAGAATGAAGAAACAGCAACACTTGGATGGTCTTATTGCACAAGTAGATCAACTCAATAAGGAGAATAACAAAATAAGAACAAGTGTTGAGATCACTACTCAGCATTACCTTAAGATTGAGGCTGAGAATGCAATTATTAGGGCTCAGGTTGAAGAACTAAGCAACAGGTTGAAATCTCTGAATGAAATCATACATTACATAAACTCACCATGTAGTTACATCTTTGATGATGAAGTTTATGAGGATACTTTGTTTAATGATTGTGGTGGCTTCATGATGGACCCTTGGAACTTTGTGCCTGTTAATCAACCAATCATGGCCTCTGCTGACATGTTCATGTATTGA 507 0.3826 MHSMASSPSCMHSSSLHNPGPSSEEDHQHQHQHHVMDQKKRKRMVSNRESAKRSRMKKQQHLDGLIAQVDQLNKENNKIRTSVEITTQHYLKIEAENAIIRAQVEELSNRLKSLNEIIHYINSPCSYIFDDEVYEDTLFNDCGGFMMDPWNFVPVNQPIMASADMFMY 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g0680 168 MobiDBLite consensus disorder prediction 1 62 - -
Lal7g0680 168 PANTHER BZIP TRANSCRIPTION FACTOR BZIP124 4 167 - -
Lal7g0680 168 CDD bZIP_plant_GBF1 40 90 IPR045314 GO:0003700|GO:0006355
Lal7g0680 168 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 37 100 IPR004827 GO:0003700|GO:0006355
Lal7g0680 168 PANTHER BZIP TRANSCRIPTION FACTOR 44 4 167 - -
Lal7g0680 168 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 42 57 IPR004827 GO:0003700|GO:0006355
Lal7g0680 168 Coils Coil 55 82 - -
Lal7g0680 168 SMART brlzneu 35 99 IPR004827 GO:0003700|GO:0006355
Lal7g0680 168 Coils Coil 90 117 - -
Lal7g0680 168 SUPERFAMILY Leucine zipper domain 39 93 IPR046347 GO:0003700|GO:0006355
Lal7g0680 168 MobiDBLite consensus disorder prediction 1 21 - -
Lal7g0680 168 Pfam bZIP transcription factor 39 96 IPR004827 GO:0003700|GO:0006355
Lal7g0680 168 Gene3D - 37 91 - -
Lal7g0680 168 MobiDBLite consensus disorder prediction 34 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g0680 Lal-Chr7 13796710 13797216 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g0680 32 168 bZIP Transcription Factor Family AT4G34590 50.714 1.65e-41 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lal7g0680 bZIP_1 2.6e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g0680 K25786 - gmx:778139 157.147
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1196 14 13965302 13966074 Lal7g0680 7 13796710 13797216 LSH
Lal7g0680 7 13796710 13797216 Lal19g0745 19 11470732 11471229 LSH