Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g0668 ATGGAGTCGAATTCTCATGGAAACCTCGATGAGCAGATTTCTCAGCTCATGCAGTGCAAACCCTTGTCCGAGCAAGAGGTAAGGGCCTTGTGTGATAAGGCAAAGGAAATTTTGATGGAAGAGAGTAATGTTCAGCCTGTGAAAAGCCCTGTTACAATTTGTGGTGATATTCATGGGCAATTCCATGACCTTGCAGAGCTGTTTCGCATTGGAGGGAAGTGTCCAGATACAAATTACTTATTTATGGGAGATTATGTTGATCGTGGCTATTATTCGGTTGAAACTGTAACGCTTTTGGTCGCCCTTAAAGTGCGTTATCGCCAGCGTATCACAATTCTGAGAGGAAATCATGAAAGCCGTCAGATTACTCAAGTTTATGGATTTTATGATGAGTGCCTACGGAAGTATGGCAGTGCTAATGTTTGGAAGATCTTCACTGATTTGTTTGATTACTTTCCATTGACAGCATTGGTTGAATCTGAAATATTTTGTCTTCATGGTGGCCTGTCCCCATCTATCGAAACCCTTGATAACATACGAAACTTTGATCGTGTACAAGAAGTTCCTCATGAGGGACCAATGTGTGATCTTCTTTGGTCTGATCCTGATGATCGATGTGGTTGGGGCATCTCTCCTAGAGGTGCTGGATATACCTTTGGCCAGGACATATCTGAACAATTTAATCATTCCAATAACTTGAAGCTGATTGCTAGAGCTCACCAGTTGGTTATGGAAGGATACAACTGGGGTCATGATCAAAAGGTGGTTACCATATTTAGTGCACCTAATTATTGTTATCGCTGTGGGAACATGGCATCCATCCTTGAAGTTGATGACTGCAAAGGACACACATTCATTCAATTTGAGCCAGCTCCAAGGAGGGGAGAGCCGGACGTAACCAGGAGAACACCCGATTACTTCCTATGA 927 0.4293 MESNSHGNLDEQISQLMQCKPLSEQEVRALCDKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRQRITILRGNHESRQITQVYGFYDECLRKYGSANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHSNNLKLIARAHQLVMEGYNWGHDQKVVTIFSAPNYCYRCGNMASILEVDDCKGHTFIQFEPAPRRGEPDVTRRTPDYFL 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g0668 308 Gene3D - 2 308 IPR029052 -
Lal7g0668 308 PRINTS Serine/threonine phosphatase family signature 50 77 IPR006186 GO:0016787
Lal7g0668 308 PRINTS Serine/threonine phosphatase family signature 79 106 IPR006186 GO:0016787
Lal7g0668 308 PRINTS Serine/threonine phosphatase family signature 112 136 IPR006186 GO:0016787
Lal7g0668 308 PRINTS Serine/threonine phosphatase family signature 147 173 IPR006186 GO:0016787
Lal7g0668 308 PRINTS Serine/threonine phosphatase family signature 176 203 IPR006186 GO:0016787
Lal7g0668 308 PRINTS Serine/threonine phosphatase family signature 232 252 IPR006186 GO:0016787
Lal7g0668 308 PRINTS Serine/threonine phosphatase family signature 254 270 IPR006186 GO:0016787
Lal7g0668 308 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED 2 308 - -
Lal7g0668 308 ProSitePatterns Serine/threonine specific protein phosphatases signature. 113 118 IPR006186 GO:0016787
Lal7g0668 308 SMART pp2a_7 22 292 IPR006186 GO:0016787
Lal7g0668 308 CDD MPP_PP2A_PP4_PP6 8 292 - -
Lal7g0668 308 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 2 308 - -
Lal7g0668 308 SUPERFAMILY Metallo-dependent phosphatases 8 293 IPR029052 -
Lal7g0668 308 Pfam Calcineurin-like phosphoesterase 50 241 IPR004843 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g0668 Lal-Chr7 13689869 13697905 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g0668 14 238 Calmodulin-binding Proteins AT5G63870 33.708 1.88e-31 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g0668 K04382 - gmx:100798408 644.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1184 14 13880927 13887505 Lal7g0668 7 13689869 13697905 LSH
Lal7g0668 7 13689869 13697905 Lal19g0731 19 11313141 11319867 LSH