Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g0662 ATGGGAGGAGGTGGTGAAAGGAAAAGAGAAGAGAAACTAAAGAAACAACAATCACTAGCAAAGAAAAAATCAGGTGGATTCGAATCTCTAGGTCTAAATCCAAATGTATTCAAAGGTGTTAGACGCAAAGGTTATAAAGTTCCTACTCCGATTCAGAGAAAAACAATGCCTATTATTCTTTCTGGTTCTGATGTTGTTGCTATGGCTCGTACTGGTTCTGGTAAAACGGCAGCGTTTCTTATTCCTATGCTTCAACGTCTTGATCAACATCTTCCTCAGGGTGGTGTTAGAGCACTTATTCTTTCTCCTACTCGTGATTTGGCTCTTCAAACTCTTAAGTTTACTCAAGAGCTTGGTCACTTTACTGACCTTCGTGTTAGTTTGTTAGTTGGTGGGGATAGTATGGAAGGCCAATTTCAGGAGTTATCTCAGAATCCAGATATTATAATTGCTACCCCTGGTAGGCTTATGCACCATTTGTCCGAGGTTGATGATATGTCGTTGCGTACTGTTGAGTATGTTGTCTTCGACGAGGCTGATTCTTTATTTGGCATGGGTTTCGCTGAGCAGTTGCATCAGATTCTCACTCAGCTCAGTGACAACCGGCAGACCTTGCTTTTCAGTGCTACATTACCCAGTGCGCTTGCTGAATTTGCTAAGGCCGGTTTGCGAGAACCTCAGCTTGTGCGCCTCGATTTGGATACTAAAATTAGTCCTGACTTGAAGGTTGTTTTTTTCACTTTGAGACAGGAAGAGAAATATGCGGCGTTGCTCTATTTGATCAGGGAACATATTCGTTCTGATGAGCAGACACTGATTTTTGTATCCACGAAATATCATGTCGATTTTCTCAACTTACTGTGTAGAGAAGAGGGTATTGAGGCATCTGTATGTTATGGTGACATGGATCATGATGCTCGCAAGATCCATGTATCGAGGTTTAGGGCAAGAAGGACAATGCTGTTGATTGTGACAGATGTTGCAGCTCGAGGCATTGACATTCCCTTGCTCGATAATGTTATCAATTGGGACTTTCCTCCAAAGCCTAAAATATTCATTCATCGAGTTGGAAGGGTTGCTAGGGCTGGTCGTACTGGTACTGCGTATTCTTTTGTTACTCCAGAAGATATGGCATCCCTTTTGGATCTTCATTTGTTTTTATCTAAACCAATCAAAGCTGCTCCCAGTGAAGAAGAGGTCTTTCAAAATATGGAGGGAGTCAAGTCAAAAATTGACCAGGCAATAGCTAATGGAGAAACCATTTATGGTCGTTTCCCCCAAACAGTCATTGACCTTGTTTCAGACAGAGTTAGGGAAATTATTGATACTTCTGCGGAGCTGGAATCATTGCAGAGAACCTGTAAAAATGCATTTCGTTTATATTCAAAAACCAAACCCGTGCCCTCAAAGGAATCCATTAGGAGAGTAAAAGATTTACCTCGTGAAGGACTACATCCAATTTTCAAAAATGTGCTGGAAACAGGGGAGTTAATGGCACTTGCTTTTTCTGAGAATTTGAAAAAGTTTAGGCCAAAGCAAACCATATTGGAAGCTGAAGGGGAGGGGGCTAAATCAAAGCATTTGCAGGGACCCAATGGCCAATGGGTTGATGTGATGAAAAGGAAAAGAGCCATTCATGAGAATATTATAAAATTGGTTCATGAACAGCATTCTAAGAGTAATGTTGAAAAGGAAAGGGAGGATAGTGAATCAGAAATCATTCCTTCCACGGAGAAAGGGAGAAAAGCACGTGGTTCTAAGAGAAAGCCACAAACTTTCAAGGATGACGAATACTATATAAGTTCAATTCCTAAAAATTCACACATGGAGTCTGGCCTTTCCGTAAAAGCTAGTGAAGAATTTGGTTCAAATAGATTGGAAGCAGCTGTCCTAGATCTAGTTGCAGATGATGGTTCTGGCATGAAGAAACAGAAATCTGTGTATCACTGGGATAAGAGGAGTAAAAAGTACATCAAGTTAAACAATGGCGACCGAGTTGCAGCAAATGGAAAGATAAAGACAGAGAGTGGTGCAAAAACGAAGGCCAACAAAACAGGTATATATAAGAGGTGGAAGGAACGCTCACACAGTAAGATATCTCTTAATGGAACGAATGATGGTGATGCTCAGGGATCAACAAGTTTGTCAGGATCTTTCCGTGGAGGTAACAGGAATTTTAAAGGAAACAGGAATAATTTTAAAGGAGGGAGGAATCAGAATTCAAATGCAAATTCTCATGTACGTTCAGAAATCAAAGATATGGATCAAATCCGAAAGGAGAGGCAGCAAAAAGCCAACAGAGTTTCATATATGAAGAGCAAATCGCCAAAGGGTAAAAAATCTGGTGGTAAACATAATGGCAAAGGAAGAAAAGGAGGAATGGGAAGGAAGGGAAAGTAA 2400 0.4075 MGGGGERKREEKLKKQQSLAKKKSGGFESLGLNPNVFKGVRRKGYKVPTPIQRKTMPIILSGSDVVAMARTGSGKTAAFLIPMLQRLDQHLPQGGVRALILSPTRDLALQTLKFTQELGHFTDLRVSLLVGGDSMEGQFQELSQNPDIIIATPGRLMHHLSEVDDMSLRTVEYVVFDEADSLFGMGFAEQLHQILTQLSDNRQTLLFSATLPSALAEFAKAGLREPQLVRLDLDTKISPDLKVVFFTLRQEEKYAALLYLIREHIRSDEQTLIFVSTKYHVDFLNLLCREEGIEASVCYGDMDHDARKIHVSRFRARRTMLLIVTDVAARGIDIPLLDNVINWDFPPKPKIFIHRVGRVARAGRTGTAYSFVTPEDMASLLDLHLFLSKPIKAAPSEEEVFQNMEGVKSKIDQAIANGETIYGRFPQTVIDLVSDRVREIIDTSAELESLQRTCKNAFRLYSKTKPVPSKESIRRVKDLPREGLHPIFKNVLETGELMALAFSENLKKFRPKQTILEAEGEGAKSKHLQGPNGQWVDVMKRKRAIHENIIKLVHEQHSKSNVEKEREDSESEIIPSTEKGRKARGSKRKPQTFKDDEYYISSIPKNSHMESGLSVKASEEFGSNRLEAAVLDLVADDGSGMKKQKSVYHWDKRSKKYIKLNNGDRVAANGKIKTESGAKTKANKTGIYKRWKERSHSKISLNGTNDGDAQGSTSLSGSFRGGNRNFKGNRNNFKGGRNQNSNANSHVRSEIKDMDQIRKERQQKANRVSYMKSKSPKGKKSGGKHNGKGRKGGMGRKGK 799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g0662 799 MobiDBLite consensus disorder prediction 556 595 - -
Lal7g0662 799 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 29 12 787 - -
Lal7g0662 799 SMART DBP10CT_2 632 694 IPR012541 GO:0003723|GO:0003724|GO:0005524|GO:0005634
Lal7g0662 799 Pfam DEAD/DEAH box helicase 49 216 IPR011545 GO:0003676|GO:0005524
Lal7g0662 799 Gene3D - 242 479 IPR027417 -
Lal7g0662 799 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 253 402 IPR001650 -
Lal7g0662 799 SMART ultradead3 44 244 IPR014001 -
Lal7g0662 799 Pfam Helicase conserved C-terminal domain 253 363 IPR001650 -
Lal7g0662 799 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 56 229 IPR014001 -
Lal7g0662 799 Pfam DBP10CT (NUC160) domain 632 693 IPR012541 GO:0003723|GO:0003724|GO:0005524|GO:0005634
Lal7g0662 799 MobiDBLite consensus disorder prediction 748 767 - -
Lal7g0662 799 SMART helicmild6 282 363 IPR001650 -
Lal7g0662 799 MobiDBLite consensus disorder prediction 1 18 - -
Lal7g0662 799 CDD DEADc_DDX54 25 230 - -
Lal7g0662 799 MobiDBLite consensus disorder prediction 694 799 - -
Lal7g0662 799 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 95 380 IPR027417 -
Lal7g0662 799 Gene3D - 5 232 IPR027417 -
Lal7g0662 799 CDD SF2_C_DEAD 248 372 - -
Lal7g0662 799 MobiDBLite consensus disorder prediction 556 581 - -
Lal7g0662 799 MobiDBLite consensus disorder prediction 773 799 - -
Lal7g0662 799 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 25 53 IPR014014 GO:0003724
Lal7g0662 799 MobiDBLite consensus disorder prediction 1 27 - -
Lal7g0662 799 PANTHER ATP-DEPENDENT RNA HELICASE RHLE-RELATED 12 787 - -
Lal7g0662 799 MobiDBLite consensus disorder prediction 700 747 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g0662 Lal-Chr7 13634480 13641910 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g0662 27 396 Eukaryotic Initiation Factors Gene Family AT1G72730 33.065 3.32e-59 205
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g0662 K14808 - gmx:100806274 1236.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g0662 7 13634480 13641910 Lal7g0662 7 13634480 13641910 ECH