Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g0660 ATGGCGGGTGTATCTCTGAAATGTGGTGATTGTGGTGCTTTGTTGAAATCGGTTGAAGAAGCTCAAGAACACGCTGAACTCACTTCTCACTCCAACTTCTCCGAATCCACCGAACCTGTTCTCAACCTCCTTTGCACCGCTTGTTCCAAACCCTGCCGATCCAAAACCGAGAGCGATTTGCATACAAAGAGAACTGGGCATACTGAGTTTGTTGATAAGACTTCGGAAGCAGCAAAACCAATAAGTTTAGAGGTTCCAAAGGTGAGTGCAACTCCAGAAGACGCTGCCACTGCAACCACTAACCAAGATGAAGAAATGGTTGTTCCTGAAGTTGACAAAAAGATACTCGAGGAACTTGAATCGATGGGATTTTCAACCACACAAGCAACACGTGCACTTCATTATTCTGGTAATGCTGGCCTTGAAGCTGCTGTCACATGGATAGTAGAGCATGAGAATGACCCTGACATAGACCAGATGCCCTTGATACCTGCCAACACGAAAGTCGAGGCTCCTAAACCTTCTCTTACCCCAGAAGAATTGAGGGCCAAACAACAGGAACTAAGGGAGAGAGCTCGCAAAAAGAAAGAAGAGGAAGAGAAGAGGACGGAGAGAGAAAGAGAGAAGGAGAGAATTCGTATTGGCAAGGAACTGCTGGAAGCTAAGAGGATTGAAGAAGAGAATGAGAGAAAACGTATATTGGCTTTGAGAAAAGCAGAGAAAGAAGAAGAGAGAAGGGCTAGAGAGAAAATCAAGCAAAAGTTGGAAGAAGATAAGGCAGAAAGAAGGCGAAGACTTGGGTTGCCTCCAGAGGAGCCTTCAGTAGCCAAACCTGCACCTGTTGTCGAGGAGAAAAAGAGTTTTCTGCCAATAAGGCCTGCCACAAAAGCTGAGCAAATGAGAGAGTGCTTGCGTTCTCTCAAGCAGAACCACAAGGAGGATGATGCTCGAGTAAAGAGGGCATTCCAAACTCTTCTAACTTATGTGGGGAATGTTGCCAGAAACCCTGATGAGGAAAAATTTAGGAAAATTCGACTTACTAACCAATCTTTTCAGGAAAGAGTTGGTGCGTTGAAAGGGGGAATCAAATTCCTGGAAATTTGTGGGTTTGAGAAGATTGATGGTGGCGAGTTTCTGTTTTTGCCTAGGAACAAGGTTGAGATGGCAGTTCTGAATTCAGCTGGGTCTGAACTAGACTCTGCAATAAAGAATCCCTTTTTCGGAGTTCTTTAG 1233 0.4485 MAGVSLKCGDCGALLKSVEEAQEHAELTSHSNFSESTEPVLNLLCTACSKPCRSKTESDLHTKRTGHTEFVDKTSEAAKPISLEVPKVSATPEDAATATTNQDEEMVVPEVDKKILEELESMGFSTTQATRALHYSGNAGLEAAVTWIVEHENDPDIDQMPLIPANTKVEAPKPSLTPEELRAKQQELRERARKKKEEEEKRTEREREKERIRIGKELLEAKRIEEENERKRILALRKAEKEEERRAREKIKQKLEEDKAERRRRLGLPPEEPSVAKPAPVVEEKKSFLPIRPATKAEQMRECLRSLKQNHKEDDARVKRAFQTLLTYVGNVARNPDEEKFRKIRLTNQSFQERVGALKGGIKFLEICGFEKIDGGEFLFLPRNKVEMAVLNSAGSELDSAIKNPFFGVL 410
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lal7g0660 410 MobiDBLite consensus disorder prediction 254 278 - -
Lal7g0660 410 Coils Coil 181 213 - -
Lal7g0660 410 SUPERFAMILY PUG domain-like 291 406 IPR036339 -
Lal7g0660 410 ProSitePatterns Zinc finger C2H2 type domain signature. 8 30 IPR013087 -
Lal7g0660 410 CDD PUB_UBA_plant 304 410 - -
Lal7g0660 410 Pfam PUB domain 317 387 IPR018997 -
Lal7g0660 410 PANTHER F13M7.16 PROTEIN 1 410 - -
Lal7g0660 410 PANTHER F13M7.16 PROTEIN 1 410 - -
Lal7g0660 410 SMART PGNneu 320 383 - -
Lal7g0660 410 MobiDBLite consensus disorder prediction 254 270 - -
Lal7g0660 410 Gene3D - 112 158 - -
Lal7g0660 410 SMART uba_6 112 150 IPR015940 -
Lal7g0660 410 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 110 151 IPR015940 -
Lal7g0660 410 Pfam UBA/TS-N domain 113 148 IPR015940 -
Lal7g0660 410 Gene3D - 296 400 - -
Lal7g0660 410 MobiDBLite consensus disorder prediction 185 209 - -
Lal7g0660 410 Coils Coil 224 261 - -
Lal7g0660 410 CDD UBA_PUB_plant 110 158 - -
Lal7g0660 410 SUPERFAMILY UBA-like 102 164 IPR009060 GO:0005515
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lal7g0660 Lal-Chr7 13619814 13628038 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g0660 93 410 C2H2 Transcription Factor Family AT1G04850 76.947 3.98e-151 429
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g0660 K24348 - gmx:100794687 650.973