Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g0649 ATGGACGGAGCGCCGCCATCTTCCTCCTCCGCCGGAACCGGAGGTGGTCCTGCCCCCTTCCTTATGAAGACATACGACATGGTTGATGATTCTTCCACCAACGACATCGTTTCATGGAGCGCTACCAACAATAGCTTCGTTGTTTGGAACTCTCCTGAATTCGCTCGCCTCCTTCTTCCAACCTATTTCAAGCATAACAATTTCTCTAGCTTTATTCGTCAGCTTAATACCTATGGATTCCGAAAAATACATCCTGAGCGATGGGAATTTGCTAATGATGATTTTCTAAAAGATCAAAAGCATCTTCTTAAGAATATTTATCGTAGGAAACCAATCCACAGTCATAGTCATCCTCCAGGTACTCCCGTGGATCCAGAAAGGGTAGCATTGGAGGAAGAAATAGAGAAACTTTCACGTGAGAAAGCTTCTCTTGAATCCAATATTTTTAGCTTCAAACAACACAAGTCAACAGCAAAGCTTCAGTTGGATGATTTTCATCAGAGATTGGATAGTATAGAGAAGCGGCAGAAAAATTTGACGAACTTCTTCGAGAAGGCTCTTCAAAATCCTGTATTTGTTGAACAGATTTCCCGCAAAATTGAGTCCATGGATTTATCAGCATATAATAAGAAAAGACGATTGCCTCAGGCAGATCACTTGTTGCCAGTTGCTGAAAGTAACTTCGTTGACGATCATAGCAATTTTAGAGTGGCATTAGGGAATGTTTTCCATCAAGATTTCTCCAATAAACTCAGACTGGAATTGTCACCAGCTGTTTCAGATATGAATCTGGTATCAGGTAGCACACAAAGTTCAACTGAAGATCGGGAAATCCCACAGAAGAAGTCATCTGAAGGAGAACTAAAAGGAGTGGAGACAAAAAAAGCTCTTTCATTTGCACCTGAAACATTAGAGCTTGCGGATACCGGGGCTTCTTTTACTTTTAACATGGATTCTTGTTTATCACGGAGAGCAGCGGCTACTGAGAGCCCAAATATGCACTCGTTAGAGCTAAGTAGTGAAGAGTGTGATAGTCATATATCCTGCCAACTAAATTTAACTCTGGCATCTAGCACATTGCAGGTAAACACAAATTCCTATTCAGCTAGATCACCCAAAATAGACTGCCAAGAAATTGGAAAGTCGGCAGAATCAAGATTTTATGGCAATGGTAAAGAATCTGATAATGGAACTTCCTCTAACCGAAATCCAGCTAATGAGGTTGCCAACTTAGCTTCACCACATGAGGCTCCAAGTAACAAACAAGTTACTGCAACTGCTCCGGAGAGGGTAAATGATGTATTTTGGGAACAATTCCTTACCGAAAGACCAGGCTGTTCAGACAATGAAGAGGCAATATCCAACTACAGAGCAAACCCATACGATGAGCAAGACGAAGGGCGGTCGGGTCATGGAATCTCTGGAAACATAAAGAGCATGGATAAGCTCACACTTTGA 1458 0.4191 MDGAPPSSSSAGTGGGPAPFLMKTYDMVDDSSTNDIVSWSATNNSFVVWNSPEFARLLLPTYFKHNNFSSFIRQLNTYGFRKIHPERWEFANDDFLKDQKHLLKNIYRRKPIHSHSHPPGTPVDPERVALEEEIEKLSREKASLESNIFSFKQHKSTAKLQLDDFHQRLDSIEKRQKNLTNFFEKALQNPVFVEQISRKIESMDLSAYNKKRRLPQADHLLPVAESNFVDDHSNFRVALGNVFHQDFSNKLRLELSPAVSDMNLVSGSTQSSTEDREIPQKKSSEGELKGVETKKALSFAPETLELADTGASFTFNMDSCLSRRAAATESPNMHSLELSSEECDSHISCQLNLTLASSTLQVNTNSYSARSPKIDCQEIGKSAESRFYGNGKESDNGTSSNRNPANEVANLASPHEAPSNKQVTATAPERVNDVFWEQFLTERPGCSDNEEAISNYRANPYDEQDEGRSGHGISGNIKSMDKLTL 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g0649 485 SUPERFAMILY "Winged helix" DNA-binding domain 16 109 IPR036390 -
Lal7g0649 485 MobiDBLite consensus disorder prediction 275 290 - -
Lal7g0649 485 Pfam HSF-type DNA-binding 20 109 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lal7g0649 485 MobiDBLite consensus disorder prediction 385 406 - -
Lal7g0649 485 ProSitePatterns HSF-type DNA-binding domain signature. 59 83 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lal7g0649 485 MobiDBLite consensus disorder prediction 446 485 - -
Lal7g0649 485 Gene3D - 15 110 IPR036388 -
Lal7g0649 485 SMART hsfneu3 16 109 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lal7g0649 485 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 13 479 IPR027725 -
Lal7g0649 485 Coils Coil 127 154 - -
Lal7g0649 485 MobiDBLite consensus disorder prediction 264 290 - -
Lal7g0649 485 PRINTS Heat shock factor (HSF) domain signature 20 43 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lal7g0649 485 PRINTS Heat shock factor (HSF) domain signature 58 70 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lal7g0649 485 PRINTS Heat shock factor (HSF) domain signature 71 83 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lal7g0649 485 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-5 13 479 - -
Lal7g0649 485 MobiDBLite consensus disorder prediction 389 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g0649 Lal-Chr7 13542767 13546478 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g0649 20 485 HSF AT4G13980 53.053 8.02e-163 467
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Lal7g0649 HSF_DNA-bind 1.2e-30 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g0649 K09419 - gmx:100816484 760.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g0649 7 13542767 13546478 Lal7g0649 7 13542767 13546478 ECH