Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g0628 ATGACAACAACACCTGGTTTCGAATACAATATCAATGAACTGTATCGAATAGCTCAAACAAGATGGTTGAAGCCTGCGGAAGTGATGTACATTTTACAAAATCATGAGAAGTACCAGTTCACCGAAGAGGCACCTCAACAGCCAACTAGCGGGTCCCTGTTTCTGTTTAACAAAAGAGTCCTGCGTTTCTTCCGTAGAGATGGCCATAACTGGCGGAAGAAAAGAGATGGAAGAACTGTGGGAGAAGCACATGAACGCCTTAAGGTTGGAAATGTTGAGGCCTTAAATTGTTACTATGCACATGGAGAGCAGAACCCTACTTTCCAAAGGCGGAGCTTTTGGATGTTGGATCCGGCATATGACCATATTGTTCTTGTGCATTACAGAGAAACAAGTGAGGGAAAGTCCAGTTCAGGATCTGGCGCACAATCGTCACCAGGTTCCTCTTCTGCATTTACTCCAAGTCCTAGCTCATACTCTACTCACAACCCGGGGTCAACATCCATACACGGTGATTCAAATGAGCCTAATCGGAGTTTCTCCAGTCCTTTATCTGTAGAAGTTACCTCGGACATATACACTGGGAACAATGGATTGGGTCAATTAGATGGAACATATGCAGAATCAGAAACCTCAACTGAACTCAACGTTTCTCAAGCTTTGCGCCGATTGGAAGAGCAGTTAAGTTTGAATGAGGAAAACGTTAAAGATATTCCCTTCTACAGTGAGAATGACACTACACTTGATTCATACCCTCAGCAAAATAAAGAGGTGATATGCAAGCAAGAGCTATTTTATGATGGATATAATGGACAGCAAGGTGATGATGGTAAGTATTATCCTGAGTCGCTAGACCATAATTGCCCTGATGGAAATAAAAAAGCGTTGTCTTGGACGGAGATGTTGGAATCATCCTCATCTGCAGCCAACTTACCGCAGAAAAATGTATACATACCAGCTATAAATGGAAGTTCTCCATCATCGTCAAGAACGGAACCGATTGCCAACCAGGAATACAGTCACTGGCTAAACTTCAACAGTAATAATGCTGAAAACTGCATTGCTGGAGACAAATTTCCTCCATATTCTTTGATGGTAGGAACACAACAAAGTAATTCTGACTACTACGCCACTTTGTTTGACCAAAACCAAATTGTCGCACCTCTGGATACAGATTCAAGCTTGACTGTAGCACAAAATCAGAAGTTTACTATTAAGGAAGTCTCTCCAGAATGGGGCTATACCACTGAAACTACGAAGGTCATCATTGTTGGGTCCTTTCTCTGTCATCCCTCGGATTCTGCATGGGCTTGTATGTTCGATGATGTGGAAGTTCCTGTTGAGATAATTCAAGACAGTGTAATTTGTTGCGAAGCTCCACCTCACCTTGGCGGAAAGGTAACTCTGTGCATTACTTCTGGGAACCGAGAGTTGTGCAGCGAAGTCAGACAGTTCGAGTATCGCGACAAGACCAATTATTGCAGCCACTGTAATTCATTGGAAACAGAAGCCACTATTAGAAGTCCAGAAGAGCTGCTATTACTCGTTAGATTTGAGCAGATGCTCCTTTCGGATTCAACTATAAAGAATGACAACGCGGAATCTGGAAGTCATCTCGTAAAACAGAAAGCCGACGATGATTCATGGAGCCAGATTATAGAGACTCTTCTAGTTGGCAGTGGAAACTCATCTGGTACTATTGATTGGCTTCTTGAAGAACTTCTAAAGGATAAGCTTCAGATATGGCTTTCTCGCAGATCCCATGACAGAGATAACGAGACAGGCCTCGCTCTTTCCAAGAAAGAGCAGGGCATTATTCATATGGTTGCTGGGTTGGGTTTTGAGTGGGCCTTGAACCCTATTCTTAGTTGTGGTGTGAATATAAATTTCCGTGACATCAGTGGCTGGACCGCGCTTCATTGGGCTGCACGTTTTGGAAGGGAAAAAATGGTTGCTTCGCTTATAGCTTCTGGTGCATCTGCTGGAGCAGTGACAGATCCAAGTGCACGAGATCCAATCGGTAAAACTGCAGCTTCTATTGCATCCAGCAATGGGCATAAGGGACTTGCAGGGTATCTCTCAGAGGTAGCTTTAACAAGCCATCTGTCATGTCTCACACTCGGAGAGAGTGAGTTATCAAGAAGTTCGGCTGAGTTTGAAGCTGATTTAAAAGTTTCTAGTGTTCCGAAGGTAAATCTCACAACCAGTGAGGATCAGGAATCACTCAAAGATACCTTGGCAGCTATCAGAAATGCAGCTCAGGCAGCTGCACGGATACAATCTGCATTCCGTTCACATTCCTTTAGAAAACGAAGAACCAAAGAAGCTGCTGCTAGTATGGGTAGCTACGCTATCGATGCTGGTAACATCGGTAACATTCCAGAGCTTTCTGCTTTCTCAAAGCATGCCTTTCGGAATTCACGTGAACACAATTCAGCGGCCTTATCAATTCAGAAGAAATATCGAGGTTGGAAAGGTCGTAAAGATTTCTTAACATTGCGTCAAAAAGTAGTGAAGATACAGGCTCATGTGAGGGGTTACCAGGTTAGGAAGCATTGCCGGGTATTATGGGCCGTCGGAATCTTGGACAAGGTTGTGCTGCGATGGCGAAGAAAAGGAGTTGGTTTACGAGGTTTCCGACAAGATATAGACACAATTGATGAAGATGAAGATGAAGATATCCTCAAGGTGTTCAGAAAACAAAAGGTGGATGTCGAAATCAACCAGGCTGTTTCGCGGGTTCTCTCCATGGTTGATTCTCCAAATGCTCGGCAGCAATATCATCGCATGCTTGAGAAGTATCATCAAGCTAAGGCCGAACTCGCCGGTACGAGTGAAGAAGCAACATTATCATCTTCTGTTGAGGATGTTTTCAATATGGAACAGGATGATATGTATCAATTTCCCTAG 2910 0.4364 MTTTPGFEYNINELYRIAQTRWLKPAEVMYILQNHEKYQFTEEAPQQPTSGSLFLFNKRVLRFFRRDGHNWRKKRDGRTVGEAHERLKVGNVEALNCYYAHGEQNPTFQRRSFWMLDPAYDHIVLVHYRETSEGKSSSGSGAQSSPGSSSAFTPSPSSYSTHNPGSTSIHGDSNEPNRSFSSPLSVEVTSDIYTGNNGLGQLDGTYAESETSTELNVSQALRRLEEQLSLNEENVKDIPFYSENDTTLDSYPQQNKEVICKQELFYDGYNGQQGDDGKYYPESLDHNCPDGNKKALSWTEMLESSSSAANLPQKNVYIPAINGSSPSSSRTEPIANQEYSHWLNFNSNNAENCIAGDKFPPYSLMVGTQQSNSDYYATLFDQNQIVAPLDTDSSLTVAQNQKFTIKEVSPEWGYTTETTKVIIVGSFLCHPSDSAWACMFDDVEVPVEIIQDSVICCEAPPHLGGKVTLCITSGNRELCSEVRQFEYRDKTNYCSHCNSLETEATIRSPEELLLLVRFEQMLLSDSTIKNDNAESGSHLVKQKADDDSWSQIIETLLVGSGNSSGTIDWLLEELLKDKLQIWLSRRSHDRDNETGLALSKKEQGIIHMVAGLGFEWALNPILSCGVNINFRDISGWTALHWAARFGREKMVASLIASGASAGAVTDPSARDPIGKTAASIASSNGHKGLAGYLSEVALTSHLSCLTLGESELSRSSAEFEADLKVSSVPKVNLTTSEDQESLKDTLAAIRNAAQAAARIQSAFRSHSFRKRRTKEAAASMGSYAIDAGNIGNIPELSAFSKHAFRNSREHNSAALSIQKKYRGWKGRKDFLTLRQKVVKIQAHVRGYQVRKHCRVLWAVGILDKVVLRWRRKGVGLRGFRQDIDTIDEDEDEDILKVFRKQKVDVEINQAVSRVLSMVDSPNARQQYHRMLEKYHQAKAELAGTSEEATLSSSVEDVFNMEQDDMYQFP 969
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g0628 969 ProSiteProfiles CG-1 DNA-binding domain profile. 11 137 IPR005559 GO:0003677
Lal7g0628 969 PANTHER CALMODULIN-BINDING PROTEIN 6 968 - -
Lal7g0628 969 Pfam IPT/TIG domain 404 487 IPR002909 -
Lal7g0628 969 Pfam CG-1 domain 18 130 IPR005559 GO:0003677
Lal7g0628 969 Gene3D Immunoglobulins 397 493 IPR013783 -
Lal7g0628 969 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 6 968 - -
Lal7g0628 969 Pfam IQ calmodulin-binding motif 812 830 IPR000048 GO:0005515
Lal7g0628 969 Pfam IQ calmodulin-binding motif 835 854 IPR000048 GO:0005515
Lal7g0628 969 ProSiteProfiles Ankyrin repeat profile. 634 666 IPR002110 GO:0005515
Lal7g0628 969 ProSiteProfiles IQ motif profile. 810 839 IPR000048 GO:0005515
Lal7g0628 969 Gene3D - 809 858 - -
Lal7g0628 969 SMART iq_5 751 773 IPR000048 GO:0005515
Lal7g0628 969 SMART iq_5 832 854 IPR000048 GO:0005515
Lal7g0628 969 SMART iq_5 809 831 IPR000048 GO:0005515
Lal7g0628 969 SUPERFAMILY Ankyrin repeat 603 695 IPR036770 -
Lal7g0628 969 ProSiteProfiles Ankyrin repeat region circular profile. 634 660 - -
Lal7g0628 969 Pfam Ankyrin repeats (3 copies) 616 694 IPR002110 GO:0005515
Lal7g0628 969 ProSiteProfiles IQ motif profile. 752 781 IPR000048 GO:0005515
Lal7g0628 969 MobiDBLite consensus disorder prediction 133 183 - -
Lal7g0628 969 SMART CG_1_2 14 132 IPR005559 GO:0003677
Lal7g0628 969 CDD IPT 404 489 - -
Lal7g0628 969 SUPERFAMILY E set domains 404 488 IPR014756 -
Lal7g0628 969 Gene3D - 521 699 IPR036770 -
Lal7g0628 969 ProSiteProfiles IQ motif profile. 833 858 IPR000048 GO:0005515
Lal7g0628 969 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 805 857 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g0628 Lal-Chr7 13265103 13273278 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g0628 7 969 CAMTA Transcription Factor Family AT1G67310 51.412 0.0 903
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Lal7g0628 CG-1 2e-47 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g0628 K21596 - gmx:100786880 1386.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g1653 4 20584098 20597025 Lal7g0628 7 13265103 13273278 PCT
Lal7g0628 7 13265103 13273278 Lal4g1653 4 20584098 20597025 PCT