Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g0627 ATGATTTTGCTCTATGAAGTTGGGTTTGTTCTTAAAGTGAGGCATCTACTTTTAGTGCAATGTTGCTTGCTTCTGTCTTTCCTTTTCCTCATTTGGTTCATTAGCAGGGGAACTATGGACACAAATATGAGTTTTTTGGGTGATGGTGGTGGCAAGATGTGGCTCAAATGGTGGGAGAAGATCCGTGGTTTCGGAATTCATCAACACTACTACCAGTATATAGGGTCCAAAAAAGTGAAGAGAGCTATGTGGAAAAAGCTTTTTGTTGCATGGTTGGTTGGTTGGACCATGCTGTCTTTGTGCATCTTCTGTTGTATGAGCTTTCAAGCTACAGAGAAGAGGAGAGAAACTCTTGCAAGCATGTGTGATGAAAGGGCTCGGATGCTTCAGGATCAGTTTAATGTGAGTATGAACCATATCCAAGCCTTGTCCATTCTGATCTCAACCTTCCACCATGCCAAGAGCCCCTCAGCTATAGATCAGAGAACCTTTGCTAGGTACACAGAAAGAACTGCTTTTGAAAGGCCTCTTACAAGTGGTGTTGCATATGCTGTAAGGGTACTCCATTCTGAAAGGGAACAATTTGAGAAGCAACAAGGGTGGACTATTAAGAGGATGGATACTGTGGAGGAGAAACAAGTTCACAAGGATGATTATGATCCCGAGAAATTGGAACCCTCCCACATTCAAGAAGAATATGCCCCTGTCATCTTTGCACAGGATACACTTTCACATGTGATTTCTGTTGATACGCTTTCTGGAAAGGAAGATCGTGAGAATGTGGTGCGTGCAAGAGAATCAGGCAAAGGGGTTTTAACTGCACCCTTTAGGCTGCTCAAAACAAATCGTCTAGGGGTTATCCTGACATTTGCTGTCTATAGTAGAGATCTTCCATCAAATGCAACCCCAAATGAAAGGATTCAAGCTACTAATGGGTATCTTGGTGGAGTCTTTGATGTCGAGTCATTAGTGGAGAAATTACTTCAGCAACTTGCTAGCAAGCAAACTGTAATTGTTAATGTTTATGACATCACAAATCACACCCATCACATTCCCATGTATAGTTCAAATGTTTTAGGGGATACGTTCTATCATGTCAGCACTCTTAACTTTGGAGACCCTTTCAGGAAGCATGAGATGTACTGTAGTACAATTTTTGGTGTTGCGGTTAGCAATGCCCAGTTTAGAGTTGTTTTATCTGGAGTTGTGACACCTTTTATCTCGGAAGTCACTGAGCCTTATTTATTTGTTAATATGTTCAAACAGAAACCACCATGGCCATGGTTGTCAATAACTACTTCAATTGGCATCCTTGTCATTGCACTCCTTGTTGGACATATTTTCTATGCCACTGTGAATCGAATTGCCAAAGTAGAAGATGATTGCCGTGAGATGAGGGAACTTAAGAAGAGAGCTGAGGCAGCTGATGTAGCAAAATCCCAGTTTCTTGCTACTGTTTCCCACGAGATCAGAACACCAATGAATGGTGTTTTAGGGATGCTGCATATGCTTATGGACACAGATCTTGATGTAACTCAGCAGGAATTTGTCAGAACTGCACAGGTAAGTGGAAAAGCTCTGATGTCACTTATAAATGAGGTTTTGGATCAGGCAAAGATTGAAGCTGGTAAGCTAGAGCTTGAAGCAGTGCTCTTTGACTTACGGGCAATTTTGGATGATGTATTGTCACTGTTTTCTGAGAAGTCTCAAGAAAAAGGAGTAGAGTTGGGAGTTTATGTGTCAGATCAGGTTCCTGAGTTACTAATAGGTGATCCTGGAAGATTTCGGCAAATAATTACAAATCTCATGGGTAACTCAATTAAGTTCACGGACAAGGGGCATGTTTTTGTCACGGTTCATCTCGTTGAGGAGGTTGTCTATTCAACAAAAGTTGATAAAGAATCAACCTCAGAAAATACCTTGAGTGGTTTCCCTGTAGCTGATAGTCGCCGAAGCTGGGAAGGATTCAAGGCTTTCAGTCAAGAGGGACCTCTTGGTTCTTTCTCATCTTCCTCTAACGATCTCATCAGTTTGATTATATCTGTTGAGGATACAGGTGAAGGTATTCCTCTAGAAGCTCAGCCCCGCATCTTCACTCCGTTCATGAAGGTAGGTCCATCCATCTCCCGCAAACACGGGGGAACAGGAATCGGCCTAAGCATTAGCAAGTATTTGGTCCGGCTCATGAATGGGGAAATTGGATTTGTGAGTAAACCAAAGGTTGGATCCACTTTCACATTCATTACAGTCTTCGCAAATGGACTCCCCAGTTCAAATGAGTGTAAAACTCAGCAAATCATCAACCAACCTCATCTTGCATCTTCAGAATTTGAGGGCATGACTGCAATGATTATTGACCACAGACCCGTTAGAGCAAAAGTGTCTAGATATCACATTCAAAGGCTTGGCATTCATGTTGAGATGGTTTCAGATTTCAATCAAGGTTTGTCCGCTTTGACCAATGAGAATATGGTTATTAATATGGTCCTCATTGAGCAGGAGGTCTGGGACAAAGATTCAGGCATGTCATCTCACTTTGTCAATAACATAGGGAAAATTGTTCATGTGATTCCTCCAAAGATGTTCATTCTTGTTAATTCTAGTAGTTCTTCTAGAGCAATGACTGTGACATCTGGTGTTCATAACCCCGCTGTAATCACAAAACCTCTCAGAGCAAGTATGCTTGCAGCCTCACTACAACATGCTATGGGTGTTCGAAACAAGGGCACTCCTAGAAACGGCGATCTCCCAAGTTTGTCTCTTCGCCATCTTTTTCGTGGGAGAAGAATTCTAATTGTAGATGACAATAGTGTGAACCGCATGGTAGCAGCTGCAACTTTGAAAAAGTATGGAGCAGAAGTGGTTTGTGTCAGTAGTGGAAAAGAAGCCATCTCGTCACTGAAGCCACCACATCAGTTTGATGCCTGTTTCATGGATATTCAAATGCCAGAAATGGATGGGTTTGAAGCTACAAGGACTATTCGGGATATGGAACTTAGCACGAACAATGAAGTGTCTGTGGATGACTTTGACAATGTTTCTAATTGGCATGTACCCATTGTAGCCATGACAGCAGACGTGATCCAGGCAACACAGGAGGAATGTCTAAAGTGTGGCATGGATGGATATGTTTCTAAACCATTTGAAGTTGAACAGCTTTATAGAGAAGTTTCATGGGTTTTCCAGTCATCTTGA 3195 0.4207 MILLYEVGFVLKVRHLLLVQCCLLLSFLFLIWFISRGTMDTNMSFLGDGGGKMWLKWWEKIRGFGIHQHYYQYIGSKKVKRAMWKKLFVAWLVGWTMLSLCIFCCMSFQATEKRRETLASMCDERARMLQDQFNVSMNHIQALSILISTFHHAKSPSAIDQRTFARYTERTAFERPLTSGVAYAVRVLHSEREQFEKQQGWTIKRMDTVEEKQVHKDDYDPEKLEPSHIQEEYAPVIFAQDTLSHVISVDTLSGKEDRENVVRARESGKGVLTAPFRLLKTNRLGVILTFAVYSRDLPSNATPNERIQATNGYLGGVFDVESLVEKLLQQLASKQTVIVNVYDITNHTHHIPMYSSNVLGDTFYHVSTLNFGDPFRKHEMYCSTIFGVAVSNAQFRVVLSGVVTPFISEVTEPYLFVNMFKQKPPWPWLSITTSIGILVIALLVGHIFYATVNRIAKVEDDCREMRELKKRAEAADVAKSQFLATVSHEIRTPMNGVLGMLHMLMDTDLDVTQQEFVRTAQVSGKALMSLINEVLDQAKIEAGKLELEAVLFDLRAILDDVLSLFSEKSQEKGVELGVYVSDQVPELLIGDPGRFRQIITNLMGNSIKFTDKGHVFVTVHLVEEVVYSTKVDKESTSENTLSGFPVADSRRSWEGFKAFSQEGPLGSFSSSSNDLISLIISVEDTGEGIPLEAQPRIFTPFMKVGPSISRKHGGTGIGLSISKYLVRLMNGEIGFVSKPKVGSTFTFITVFANGLPSSNECKTQQIINQPHLASSEFEGMTAMIIDHRPVRAKVSRYHIQRLGIHVEMVSDFNQGLSALTNENMVINMVLIEQEVWDKDSGMSSHFVNNIGKIVHVIPPKMFILVNSSSSSRAMTVTSGVHNPAVITKPLRASMLAASLQHAMGVRNKGTPRNGDLPSLSLRHLFRGRRILIVDDNSVNRMVAAATLKKYGAEVVCVSSGKEAISSLKPPHQFDACFMDIQMPEMDGFEATRTIRDMELSTNNEVSVDDFDNVSNWHVPIVAMTADVIQATQEECLKCGMDGYVSKPFEVEQLYREVSWVFQSS 1064
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g0627 1064 Coils Coil 455 475 - -
Lal7g0627 1064 Pfam CHASE domain 158 354 IPR006189 -
Lal7g0627 1064 Pfam Response regulator receiver domain 930 1056 IPR001789 GO:0000160
Lal7g0627 1064 Gene3D - 106 158 - -
Lal7g0627 1064 ProSiteProfiles Response regulatory domain profile. 781 903 IPR001789 GO:0000160
Lal7g0627 1064 Gene3D - 919 1060 - -
Lal7g0627 1064 CDD REC_hyHK_CKI1_RcsC-like 930 1057 - -
Lal7g0627 1064 ProSiteProfiles Histidine kinase domain profile. 485 753 IPR005467 -
Lal7g0627 1064 Pfam His Kinase A (phospho-acceptor) domain 478 543 IPR003661 GO:0000155|GO:0007165
Lal7g0627 1064 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 463 544 IPR036097 GO:0000155|GO:0007165
Lal7g0627 1064 CDD HATPase_EvgS-ArcB-TorS-like 595 748 - -
Lal7g0627 1064 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 532 748 IPR036890 -
Lal7g0627 1064 PRINTS Bacterial sensor protein C-terminal signature 678 692 IPR004358 GO:0016310|GO:0016772
Lal7g0627 1064 PRINTS Bacterial sensor protein C-terminal signature 696 706 IPR004358 GO:0016310|GO:0016772
Lal7g0627 1064 PRINTS Bacterial sensor protein C-terminal signature 713 731 IPR004358 GO:0016310|GO:0016772
Lal7g0627 1064 PRINTS Bacterial sensor protein C-terminal signature 737 750 IPR004358 GO:0016310|GO:0016772
Lal7g0627 1064 SMART HisKA_10 478 543 IPR003661 GO:0000155|GO:0007165
Lal7g0627 1064 PANTHER HISTIDINE KINASE 3 55 383 - -
Lal7g0627 1064 PANTHER HISTIDINE KINASE 3 420 1063 - -
Lal7g0627 1064 Gene3D - 447 541 - -
Lal7g0627 1064 SMART REC_2 928 1057 IPR001789 GO:0000160
Lal7g0627 1064 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 590 748 IPR003594 -
Lal7g0627 1064 PANTHER TWO-COMPONENT HISTIDINE KINASE 55 383 - -
Lal7g0627 1064 PANTHER TWO-COMPONENT HISTIDINE KINASE 420 1063 - -
Lal7g0627 1064 SMART CHASE_2 155 356 IPR006189 -
Lal7g0627 1064 Gene3D CHASE domain 159 385 IPR042240 -
Lal7g0627 1064 SUPERFAMILY CheY-like 925 1059 IPR011006 -
Lal7g0627 1064 CDD PRTases_typeI 878 957 IPR000836 -
Lal7g0627 1064 CDD HisKA 478 539 IPR003661 GO:0000155|GO:0007165
Lal7g0627 1064 SMART HKATPase_4 590 753 IPR003594 -
Lal7g0627 1064 SUPERFAMILY CheY-like 777 905 IPR011006 -
Lal7g0627 1064 ProSiteProfiles CHASE domain profile. 155 381 IPR006189 -
Lal7g0627 1064 ProSiteProfiles Response regulatory domain profile. 929 1061 IPR001789 GO:0000160
Lal7g0627 1064 Gene3D - 542 752 IPR036890 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g0627 Lal-Chr7 13255756 13262965 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g0627 1 1063 Miscellaneous Gene Families AT1G27320 63.620 0.0 1336
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lal7g0627 CHASE 1.7e-36 CL0165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g0627 K14489 - gmx:100801546 1617.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1143 14 13579696 13586493 Lal7g0627 7 13255756 13262965 LSH