Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g0624 GCATTTATGAATGGTTGGTGGCCTTGGTTTTTAAGGAAAGCTAAAACTGGTTCTGTTGTTAACTATTTTTCTAGTGTTGGAAGTTCTGCGGTGAAGATTACAGATTTTGAGCACTCTGATGGATTGGAACGCAAAATCTCCGTCACAATACAGATTTTGAGCACTCTGATGGATTGGAACGCAAAATCTCCGTCACAGTGGGACTGGGAGCACTCACTCTTCCTGAATTCAAAAGCAACAGAATATTCCAAATCACAGCCACCAAACTGGAATGGCGAAACAAACCAAGAAATCAATGCCGGGTTGTTAGATACATCCGGTGGCAGTGGTTGTTCCAGGTCTGAGCTAGTCTATGCTTCTTCATCAAAGGGCTCAATATCAGCTTCCATCAATTCACCATCAAACAACGATAGCAAAACATCTATGTACACGTTTGAAAGTTCCTTTGATGATTCCAGTGGTAAAAACAAACTGTCTGAGGTTGAAATTTCTCATGCGCGAGAGCTTTCTTCGGCCTCTGGTGAACCATTGCTCTCTCTGAAACTTGGTAGGCGGCTCTACTTTGAGGATGTTTGCACAGCAAGTAATTCAAAGAGTCCATTGTTTTCGGGGGCTCCTATGTCATCTTTGAGTGCTGGTAAAAAATGCAAGTCCAATGGTCAGAATGTACAATTTCCATGCTGTCAGGTTGAAGGCTGTGGTCTCGATCTCTCAGCAGCTAAAGATTACTATCGCAAACATAGAGTTTGCGACAGTCATTCCAAATCCCCTAAGGTGGTCATAGCTGGTAAGGAACGTCGATTTTGCCAGCAATGTAGCAGGTTCCATGGTCTGTCAGAGTTTGATGAGAAAAAGAGAAGCTGCAGACGACGTCTTTCCGATCACAATGCAAGGCGCCGTAAACCTCAACTTGTACCCGTCCAATTAAATCAACCAACTTTGTCTTCATCAGCCCATGATGGAAGGCAACATATGAGCCGATTCACTTATTCAAGGACTGCTACAAATTTAGCCTGGCAACACACACACAGCAGCAAGCTCCCCCAGACAAAAGATTTTCTCTTGAATCCTGCAAAATCCAATAATGAAATACCGAGTATTGGTACTACGGTTTCTTATGATTTCGAAACCCCCTTTACACTGAAGGGCATTGTAACGAAGAATATCAATACAGGAATAGAAGACTCAATTACCTCCTCTGATCCTACTGTCACACAAGATTTTCACCGTGCTCTCTCTCTTCTGTCAACCAATTCTTGGGGTTCGCATGAGCCGAAACACGAACCACCGAACAAAGCAGCCACAACCATGCCTGTAACACATGCTACGAGTCAGCGCTTACCTCCGGAGTATTGGCATATTGGTCAACAACCAGTGAATTCTAGCATGTGGATCTCCTACTCAAATTGTGATGATATCAATCGCTTTCAAGAATTTCAACTGTTTAGAGAACCTTATGAGTCTGGTTTTCCTTACAACCAGTTGGATTAA 1491 0.4319 AFMNGWWPWFLRKAKTGSVVNYFSSVGSSAVKITDFEHSDGLERKISVTIQILSTLMDWNAKSPSQWDWEHSLFLNSKATEYSKSQPPNWNGETNQEINAGLLDTSGGSGCSRSELVYASSSKGSISASINSPSNNDSKTSMYTFESSFDDSSGKNKLSEVEISHARELSSASGEPLLSLKLGRRLYFEDVCTASNSKSPLFSGAPMSSLSAGKKCKSNGQNVQFPCCQVEGCGLDLSAAKDYYRKHRVCDSHSKSPKVVIAGKERRFCQQCSRFHGLSEFDEKKRSCRRRLSDHNARRRKPQLVPVQLNQPTLSSSAHDGRQHMSRFTYSRTATNLAWQHTHSSKLPQTKDFLLNPAKSNNEIPSIGTTVSYDFETPFTLKGIVTKNINTGIEDSITSSDPTVTQDFHRALSLLSTNSWGSHEPKHEPPNKAATTMPVTHATSQRLPPEYWHIGQQPVNSSMWISYSNCDDINRFQEFQLFREPYESGFPYNQLD 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g0624 496 SUPERFAMILY SBT domain 226 304 IPR036893 GO:0003677|GO:0005634
Lal7g0624 496 ProSiteProfiles Zinc finger SBP-type profile. 225 302 IPR004333 GO:0003677
Lal7g0624 496 Gene3D - 218 289 IPR036893 GO:0003677|GO:0005634
Lal7g0624 496 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 2 76 495 - -
Lal7g0624 496 Pfam SBP domain 228 301 IPR004333 GO:0003677
Lal7g0624 496 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 76 495 IPR044817 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g0624 Lal-Chr7 13228922 13237121 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g0624 57 430 SBP-box Gene Family AT1G27370 40.921 4.10e-61 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Lal7g0624 SBP 4.2e-31 No_clan