Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g0609 ATGTGTATGATGGATGTTGAAGAAAATCTGTTTGCACCAGTTGATGCCAAGTTACATGTAGAAATGTGCAAGGTGCTTTCAGTAATATATTGCAAAGTATTGTCAGTACTTCCTTCTTTAGAAGCAGCTAGGCCTCGGAGCAAATCCGGAATTCGGGCATTATGTTCATTGCATGTAGCCCTAGAGAAGGCGAAGAATGTTCTTCAGCACTGCTCAGATTGTAGCAAACTTTACCTGGCTATAACTGGGGATTCTGTTCTTCTAAAATTTGAGAAGGCTAAATGTGCTATTGAAGGCAGTCTTAAACATGTGGAAGATATTGTTCCACAATCTATTGGATTTCAGATTCAGGAGATTTTGAATGAGCTTGTCAGTGTGGTATTCACACTTGACCCATCAGAGAAGCAAGTTGGTGATGCTTTAATTACATTACTTCAGCAGGGGAGAAAGTTCAATGACTGTAATGACAGTAATGAGCTTGAATCTTTTCACCAAGCCGCCATTAGACTTGGAGTCACATCTTCAAGAGCAGCTCTTACTGAAAGAAGGGCCCTCAAGAAACAAATAGAAAGGGCTCGGGCTGAGGAAGACAAGCGGAAGGAAGCAATCATTGCATATCTTTTACATCTTATGAGGAAATACTCGAAGTTATTTAGAAGCGAGATCTCAGATGACAATGACTCTCAGGGTTCTGGACCTTGTTCTCCAAATGTTCAGGGATCTATTGAGGATGGTGATTCTGTTGGTCATTATCAGGCCTTTGACAGACAGCTTTCAAAACTTAGTTCCTTTAATTTTAAGCCAAATAATTGGACATCAGGTCAGATGCCTGTTCCACCTGAAGAGCTAAGGTGTCCAATATCTCTGCAACTCATGTATGATCCTGTTATTGTTGGTTCTGGGCAAACATTTGAAAGAGTTTGCATTGAGAAATGGTTCAGTGATGGGCACAACACCTGCCCAAAGACCCAACATAAACTTTCTCATCTTTGTTTGACTCCTAATTACTGTGTTAAGGGTCTTGTTGCTAGTTGGTGTGAACAGAATGGCCTTCCTATTCCTGAAGGCCCTCCTGAATCCCTTGATCTTAACTACTGGAGATTGGCATTATCAGAGTCTGAATCTACAAATTCAAGATCTTTAAACAGTGTCAACTCGTGCAAATTGAATGGTGTCAAAGTAGTTCCTTTGGAAGAGAATTGTATCTTAGAGGAAAGTGGAACTGTAGGTGTGTCTACAGAAGAGGAAAGTGCTGACCAATATTTTCAGTTTCTGAAAGTCTTGACTGAGGGGAACAATTGGAAGAGCAAGTGTAAAGTGGTAGAACGATTAAGGCTGATGCTGAGAGATGACGAGGAAACAAGGGATTTTATGGGGGCTAATGGGTTTGTTGAAGCACTTTTGCAGTTTTTGCAATCAGCTTTGCATGAAGGGAATTTGATGGCTCGGGAAAGTGGAGCAATGACTCTCTTCAACCTGGCTGTAAACAACAACAGAAATAAGGAAATTATGTTATCCTCAGGAGTATTGCTTTTGTTGGAGGAAATGGTTTCTAACACTAGTTCTTATGGCTGTGCAACGGCCCTATATCTCAATCTCTCTTGCCTTGAAGAAGCAAAGCATTTGATCGGGATGAGTCAGGCTGTTCGATTCCTAATCCAGCTTCTTCAAGACGACTCTGATGTTCAATGCAAGCAAGATTCTCTTCATGCTCTCTACAATCTTTCTACCGTGCCCTCCAATATTCCATACCTCCTTTCATCAGGCATCATTGATGGCCTGCAATCCTTTCTTGTAGGCCAGGGTGATTGCTTGTGGACAGAAAAATGCATAGCTGTTTTGATAAATTTCGCTACTTCTCAAGTCGGAATAGAGGAAATGGTTTCAAATCCTGGGCTCATAAGCGCGTTGGCTTCAATTTTGGACATCGGTGAGCTCCTAGAACAGGAGCAAGCCATGTCTTGTCTCCTAATTTTGTGTAACAGAAGTGAGAAATGTATTGAGATGGTCCTACAGGAAGGGGTTATACCTGCATTGGTTTCTATATCAGTGAATGGAACCTCGAGAGGGAGAGAAAGAGCTCAGAAACTCCTGATGCTGTTCCGAGAGCAGCGGCAACGAGACCATTCGCCAGTTGAAACACACCAGTGTCCTCCTGAAACTAGTGATTTGTCTATGCCGCCCGTGGAAATGAAACCACAATGCAAGTCTACGCCTAGAAAAAAGTTGGGGAAGGCTTTTAGCTTTTTCTTGAAAACCAAAAGCTATTCCCTTTCTCAGTGTTAA 2286 0.4195 MCMMDVEENLFAPVDAKLHVEMCKVLSVIYCKVLSVLPSLEAARPRSKSGIRALCSLHVALEKAKNVLQHCSDCSKLYLAITGDSVLLKFEKAKCAIEGSLKHVEDIVPQSIGFQIQEILNELVSVVFTLDPSEKQVGDALITLLQQGRKFNDCNDSNELESFHQAAIRLGVTSSRAALTERRALKKQIERARAEEDKRKEAIIAYLLHLMRKYSKLFRSEISDDNDSQGSGPCSPNVQGSIEDGDSVGHYQAFDRQLSKLSSFNFKPNNWTSGQMPVPPEELRCPISLQLMYDPVIVGSGQTFERVCIEKWFSDGHNTCPKTQHKLSHLCLTPNYCVKGLVASWCEQNGLPIPEGPPESLDLNYWRLALSESESTNSRSLNSVNSCKLNGVKVVPLEENCILEESGTVGVSTEEESADQYFQFLKVLTEGNNWKSKCKVVERLRLMLRDDEETRDFMGANGFVEALLQFLQSALHEGNLMARESGAMTLFNLAVNNNRNKEIMLSSGVLLLLEEMVSNTSSYGCATALYLNLSCLEEAKHLIGMSQAVRFLIQLLQDDSDVQCKQDSLHALYNLSTVPSNIPYLLSSGIIDGLQSFLVGQGDCLWTEKCIAVLINFATSQVGIEEMVSNPGLISALASILDIGELLEQEQAMSCLLILCNRSEKCIEMVLQEGVIPALVSISVNGTSRGRERAQKLLMLFREQRQRDHSPVETHQCPPETSDLSMPPVEMKPQCKSTPRKKLGKAFSFFLKTKSYSLSQC 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g0609 761 MobiDBLite consensus disorder prediction 224 242 - -
Lal7g0609 761 PANTHER U BOX DOMAIN-CONTAINING 3 753 - -
Lal7g0609 761 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 278 351 IPR013083 -
Lal7g0609 761 MobiDBLite consensus disorder prediction 705 737 - -
Lal7g0609 761 Pfam U-box domain 280 349 IPR003613 GO:0004842|GO:0016567
Lal7g0609 761 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 462 508 IPR000225 GO:0005515
Lal7g0609 761 SUPERFAMILY RING/U-box 276 354 - -
Lal7g0609 761 SUPERFAMILY ARM repeat 420 703 IPR016024 -
Lal7g0609 761 Gene3D - 402 713 IPR011989 -
Lal7g0609 761 SMART Ubox_2 282 345 IPR003613 GO:0004842|GO:0016567
Lal7g0609 761 Coils Coil 175 202 - -
Lal7g0609 761 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 3 753 - -
Lal7g0609 761 CDD RING-Ubox_PUB 283 324 IPR045210 -
Lal7g0609 761 MobiDBLite consensus disorder prediction 222 242 - -
Lal7g0609 761 ProSiteProfiles U-box domain profile. 278 352 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g0609 Lal-Chr7 13108253 13113726 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g0609 1 761 U-box Gene Family AT1G27910 64.221 0.0 981
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g0609 - - gmx:100794099 1223.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g1343 21 16814733 16824771 Lal7g0609 7 13108253 13113726 PCT
Lal17g1662 17 17855459 17862227 Lal7g0609 7 13108253 13113726 PCT
Lal7g0609 7 13108253 13113726 Lal21g1343 21 16814733 16824771 PCT
Lal7g0609 7 13108253 13113726 Lal17g1662 17 17855459 17862227 PCT