Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g0601 ATGTATTTATCAGAAAAACATAATCCCATTGATTTCTACAAAGAACAAGTGGACCCCACCACCCGTGACATGATCTTAGACGTCGTCGTTTCAACCAATAACTTCCCACCACCACCACCACCGAACTACCACCACCATATCATCCTCGCCGAAAGCAGCGGCGACGAACCGGAACCAGAAAAACATGAAACCAAAGCCCCTAAAAAACGCGCTGAGACATGGGTCCAAGACGAAACTCGCACTCTCATCGCGCTTCGTCGAGAGAGGGATATTCTATTCAACACTTCCAAATCAAACAAGCATTTGTGGGACCAAATTTCTTCTAAGATGAGGGTAAAAGGGTTTGATCGATCTCCAACTATGTGTACTGATAAGTGGAGAAATTTGTTGAAAGAGTTCAAGAAAGTTAAACATCAAGATAGAAGAAAAAATGGGTCTTCTCCTAAGATGAGTTATTACAAAGAGATTGAGGATATTTTGAAGGAGAGAGGAAAAACTGTGCAATATAAGACCCCTTGTTGCAATCATAAAGTTGATTCCTTTATGCCTTTTTTAGATAAAGGTATGGAAGATACAAGCATCTCTTTTGGGCCTGTTGAAGCTACTGGCAGACCAACACTCAGTCTTGAGAGACGTCTGGATCATGACGGATATCCTCTTGCCATGACCGAAGCTGATGCAGTTGGAGCTAATGGAGTTCCTCCTTGGAATTGGAGAGAAACTCCTGGAACTGGTGAAGAAGGCGAGTCATCTTTTGGAAGGGTTATATCAGTCAAATGGGGTGATTATACAAGAAGAATAGGTATTGATGGTGCTGCAGAAGCCATCAAGGAGGCAATTAGGGCTGCTTTTAGGTTGAGAACTAAACGTGCATTTTGGTTGGAGGATGAAGATCGAGTAATCAGAAGTATTGATCGTGACATGCCTTTGGGTAGTTACACTCTTCACCTTGATGAAGGAATGGCCGTTAAGATATGCCTCTATGACGAGTCTGACCATATCCCTGTGCATACCGAAGACAAGCTCTTTTACACCGAAGAGGATTATCGTGATTTTCTGTCGCGCCGGGGTTGGACATGTCTCAGGGAATTTGATAGCTTCAGACATATCGATACTTTGGATGATCTCCGACCAGGTGCCATTTACCGTGGCGTGAGTCTGAGTCCAGGTGCACTGTAG 1179 0.4377 MYLSEKHNPIDFYKEQVDPTTRDMILDVVVSTNNFPPPPPPNYHHHIILAESSGDEPEPEKHETKAPKKRAETWVQDETRTLIALRRERDILFNTSKSNKHLWDQISSKMRVKGFDRSPTMCTDKWRNLLKEFKKVKHQDRRKNGSSPKMSYYKEIEDILKERGKTVQYKTPCCNHKVDSFMPFLDKGMEDTSISFGPVEATGRPTLSLERRLDHDGYPLAMTEADAVGANGVPPWNWRETPGTGEEGESSFGRVISVKWGDYTRRIGIDGAAEAIKEAIRAAFRLRTKRAFWLEDEDRVIRSIDRDMPLGSYTLHLDEGMAVKICLYDESDHIPVHTEDKLFYTEEDYRDFLSRRGWTCLREFDSFRHIDTLDDLRPGAIYRGVSLSPGAL 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g0601 392 CDD GT1 72 137 - -
Lal7g0601 392 PANTHER - 5 385 - -
Lal7g0601 392 SMART sant 70 132 IPR001005 -
Lal7g0601 392 Gene3D - 74 135 - -
Lal7g0601 392 ProSiteProfiles Myb-like domain profile. 66 130 IPR001005 -
Lal7g0601 392 PANTHER TRIHELIX TRANSCRIPTION FACTOR GT-4 5 385 - -
Lal7g0601 392 Pfam Myb/SANT-like DNA-binding domain 73 158 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g0601 Lal-Chr7 13004962 13011577 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g0601 1 385 Trihelix Transcription Factor Family AT3G25990 64.213 3.64e-178 499
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lal7g0601 Myb_DNA-bind_4 3.1e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g0601 - - aip:107632016 578.17