Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g0586 ATGAAGCTCTCTTCAGCTGGTTTTAGTCCTCCACCCGGAGAAGGAGAAAAGCGAGTTTTGGATTCAGAACTTTGGCATGCATGTGCCGGTCCCCTTGTTTCTTTACCAGCTGTTGGAAGCCGTGTGGTCTACTTTCCACAAGGTCACAGTGAACATGTTGCTGCATCAACGAACAGGGAAGTGGATGGCCATATGCCCAATTATCCAAGCTTACCTCCCCAACTTATGTGTCAACTTCATAACGTGACTATGCATGCAGATGCTGAGACTGATGAAGTATATGCACAGATGACCTTGCAACCTCTGAGTCCTGAAGAGCAAAAGGAGGCATACTTTCCAGCAGATTTGGGCACTCCGAGTAATCAGCCAACAAACTACTTTTGCAAAACTTTGACTGCCAGTGACACAAGCACACATGGGGGATTTTCAGTTCCTCGTCGAGCAGCTGAAAAAGTGTTTCCTCCATTGGACTTCTCCCAACAGCCTCCTTGTCAAGAGTTATTTGCAAGGGATTTGCATGGTCATGAATGGAAATTCCGGCATATCTTTCGGGGCCAGCCCAAAAGGCATCTACTTACAACGGGATGGAGTGTCTTTGTGAGTGCTAAAAGACTTGTTGCTGGTGATTCAGTGCTATTTATCTGGAATGAAAAGGGTCAATTGCTTCTTGGCATTCGGCATGCTAATCGATCACAACCTGCGATGCCTTCATCAGTGTTGTCAAGTGATAGTATGCACTTGGGCCTTCTTGCTGCTGCAGCTCATGCAGCTGCAACGAATAGTCGTTTTACCATTTTCTACAACCCACGTGCTAGCCAATCAGAATTCGTCACACCCTTAGCAAAGTATGTTAAAGCTGTCTATCATACTCGAGTTTCAGTAGGCATGCGCTTCAGGATGTTGTTTGAGACAGAAGAATCTAGTGTGCGGCGATACATGGGCACAATAACTGGCATTAGTGACTTGGACCCTGCTCGATGGCCAAATTCACATTGGCGTTCAGTCAAGGTCGGCTGGGATGAATCCATAGCAGGAGAGAGGCAACCTCGAGTGTCTCTATGGGAAATTGATCCGTTAACAACATTTCCAATGTATCCATCTTCATTCCCCCTTAGGCTTAAAAGACCATGGCCTCTAGGACTGCCTTCATACCAAGGCATGAAGGATAACGATTTCGGCATGAATTCTTCACTATTGTGGCTTCAAGGCACAACGGATAGGGGGCTTCAGTCTCTTGATTTTCAGGGAATTGGTCTTAATCCGTGGATGCAACCAAGGCTTGATCCTTCCATGGTGAATTTTCAAAACGATATGTACCAATCCATGGCTGCTGCTGCACTTCAGGATATGAGAACTTTAGATCCTTCGAAACAGCATCCTGCTTCTTCACTTCAATTTCAGCAACCACAGAACTTCCCCAACACGACTCCCGTTTTAATGCCGACACAGATGTTGCAGCAGTCTCAACCACAGCAGGATTTTCCAAATAATCCAGAAAATCAGCATTCATCTCAATTTCATAATCAAGCGCATCTTCAGCAGCATCTACAGCATCAGCACTCATTTAATAATCATCATCGTCAGCAGCAGCACCAGCAACAACAACAACAACGACAACAGCAACAAGTGGTAGATCATCAGCAGACTTCAAGTTCGGTCTCTCAGTTTGTTTCGATACCTCAAACTCAATCATCACCCGTGCAAGCTATCTCTTCACTGTGCCATCAGCAAAGTTATTCTGATTCAAGTGGGAACCCTGCGGCTACTGCTACTGCTTCTCGCCTGCACAATATGATGGGTTCATTTCCCCAGGTTGAAACATCCCACCTTCTCAACCTTCCTAGAACAAGTTTTTGGATGCCTGTTCAACCCTCAACCGCATGGCCTCCTTCGAAGCGTGTTGCAGTGGACCCACTCCTTTCATATGGAACATCTCTATGTCAAGTGGAGCAGATCGGGCAGCCACAAATAACTATGTCTGAAAATGCTGTTACATTGCCACCCTTTCCTGGTAGGGAATGCGTCGGAGAAGGGAGCACCGATCCACAAAACAATATTTTGTTTGGTGTTAATATAGATCCCTCTTCACTTCTAGTCCATAATGGGATGTCAAGTCTTAAAGGGGTCAGCGTCAATCGTGACTCATCATCCACACCTTTTCAACCTTCTAATTACCTGAATACCACAGGCACTGATTCATCATTAAATCCTGGAATGACGCACAGCATTGATGAATCGGACTTCCTACAGAATCCAGAAAACGGGGGCCTAGGAAATTCACCGATCAAAACCTTTGTGAAGGTTTACAAGTCAGGGACCTTTGGGAGATCATTGGATATCTCAAAATTCACCAACTACCATGAGCTGCGCAGTGAGCTTGCTCGCATGTTCGGCCTTGGAAGTGAGTTGGAGGATCCTGTAAGATCAGGCTGGCAGCTTGTATTTGTTGACCGAGAGAATGATGTTCTGCTCCTCGGCGATGGTCCTTGGCCGGACTTCGTAAATAGCGTATGGTGCATCAAGATACTTTCCCCGCACGAAGTGCAGCAAATGGGCAACAATGGCCTCGACCTTCTGAACTCGGTTCCGATTCAGAGGCTCTCCAACGGCATCTGTGATGACTACTCCGGCCATGAGGACCAAAGAAATTTAAGCAATGGGATAACCACTTTAGACTACTGA 2682 0.4623 MKLSSAGFSPPPGEGEKRVLDSELWHACAGPLVSLPAVGSRVVYFPQGHSEHVAASTNREVDGHMPNYPSLPPQLMCQLHNVTMHADAETDEVYAQMTLQPLSPEEQKEAYFPADLGTPSNQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPCQELFARDLHGHEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKGQLLLGIRHANRSQPAMPSSVLSSDSMHLGLLAAAAHAAATNSRFTIFYNPRASQSEFVTPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPARWPNSHWRSVKVGWDESIAGERQPRVSLWEIDPLTTFPMYPSSFPLRLKRPWPLGLPSYQGMKDNDFGMNSSLLWLQGTTDRGLQSLDFQGIGLNPWMQPRLDPSMVNFQNDMYQSMAAAALQDMRTLDPSKQHPASSLQFQQPQNFPNTTPVLMPTQMLQQSQPQQDFPNNPENQHSSQFHNQAHLQQHLQHQHSFNNHHRQQQHQQQQQQRQQQQVVDHQQTSSSVSQFVSIPQTQSSPVQAISSLCHQQSYSDSSGNPAATATASRLHNMMGSFPQVETSHLLNLPRTSFWMPVQPSTAWPPSKRVAVDPLLSYGTSLCQVEQIGQPQITMSENAVTLPPFPGRECVGEGSTDPQNNILFGVNIDPSSLLVHNGMSSLKGVSVNRDSSSTPFQPSNYLNTTGTDSSLNPGMTHSIDESDFLQNPENGGLGNSPIKTFVKVYKSGTFGRSLDISKFTNYHELRSELARMFGLGSELEDPVRSGWQLVFVDRENDVLLLGDGPWPDFVNSVWCIKILSPHEVQQMGNNGLDLLNSVPIQRLSNGICDDYSGHEDQRNLSNGITTLDY 893
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g0586 893 PANTHER AUXIN RESPONSE FACTOR 1 875 - -
Lal7g0586 893 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 1 875 IPR044835 GO:0003677|GO:0006355|GO:0009725
Lal7g0586 893 MobiDBLite consensus disorder prediction 455 519 - -
Lal7g0586 893 ProSiteProfiles PB1 domain profile. 763 847 IPR000270 GO:0005515
Lal7g0586 893 MobiDBLite consensus disorder prediction 713 754 - -
Lal7g0586 893 CDD B3_DNA 126 226 IPR003340 GO:0003677
Lal7g0586 893 Gene3D - 125 228 IPR015300 -
Lal7g0586 893 SMART B3_2 127 229 IPR003340 GO:0003677
Lal7g0586 893 Gene3D - 759 852 - -
Lal7g0586 893 Pfam Auxin response factor 253 336 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Lal7g0586 893 MobiDBLite consensus disorder prediction 526 560 - -
Lal7g0586 893 Pfam B3 DNA binding domain 127 228 IPR003340 GO:0003677
Lal7g0586 893 MobiDBLite consensus disorder prediction 453 560 - -
Lal7g0586 893 Pfam AUX/IAA family 760 848 IPR033389 -
Lal7g0586 893 Gene3D - 291 363 - -
Lal7g0586 893 ProSiteProfiles B3 DNA-binding domain profile. 127 229 IPR003340 GO:0003677
Lal7g0586 893 SUPERFAMILY DNA-binding pseudobarrel domain 112 256 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g0586 Lal-Chr7 12807461 12814765 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g0586 1 484 B3 DNA Binding Superfamily AT1G30330 81.595 0.0 796
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Lal7g0586 AUX_IAA 4.9e-06 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g0586 - - gmx:100777789 1405.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g0586 7 12807461 12814765 Lal7g0586 7 12807461 12814765 ECH
Lal4g1620 4 20366863 20372586 Lal7g0586 7 12807461 12814765 PCT