Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g0519 ATGTTTGCTTCCTTCACAAAACCCTTTCCATTTCCAAGGTGTAGCGTTAGAACTGATTCTGAATTTAGAACCCAATCCAACTCACTCAAACCGTCTTCTCTTCATTTTCAGCCTCACCCACTTGCAAGCAAAATTGTTGTTAAAAATTTACCATATTCTACTGGTGAGACAACTTTGCAGAAAGAATTTTCAAATTTTGGGAAGATAGCTGAAGTTAAAGTGGTTAAAGATGTGATCACGAAAAGATCTAAGGGGTTTGCTTTTATTCAATATACAAGTCAAGATGATGCCATGCTTGCACTAGAAACCATGGATCAGAAGGTTTTTCATGGTCGGACAATTTGTGTAGAAATTGCAACACTTGGTAGGGATGATTTTGGTGCACGCCCAAAGACCTCAGGGCCCCCGAAGAAGTGGAATTTGCCTCAGCAAGAGGAAACAGTAGACTGTTGGTACTGA 459 0.4009 MFASFTKPFPFPRCSVRTDSEFRTQSNSLKPSSLHFQPHPLASKIVVKNLPYSTGETTLQKEFSNFGKIAEVKVVKDVITKRSKGFAFIQYTSQDDAMLALETMDQKVFHGRTICVEIATLGRDDFGARPKTSGPPKKWNLPQQEETVDCWY 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g0519 152 MobiDBLite consensus disorder prediction 127 146 - -
Lal7g0519 152 SUPERFAMILY RNA-binding domain, RBD 34 126 IPR035979 GO:0003676
Lal7g0519 152 PANTHER U1 SMALL NUCLEAR RIBONUCLEOPROTEIN 70 KD 26 146 - -
Lal7g0519 152 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 45 114 IPR000504 GO:0003723
Lal7g0519 152 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 43 121 IPR000504 GO:0003723
Lal7g0519 152 PANTHER GLYCINE-RICH RNA-BINDING PROTEIN 4, MITOCHONDRIAL ISOFORM X1 26 146 - -
Lal7g0519 152 Gene3D - 16 145 IPR012677 -
Lal7g0519 152 SMART rrm1_1 44 117 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g0519 Lal-Chr7 11895633 11898809 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g0519 40 143 Eukaryotic Initiation Factors Gene Family AT2G36660 27.885 4.42e-06 43.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g0519 - - lang:109359823 293.508