Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g0208 ATGGCAGCCTCTACCATGGCACTATCCTCCCCATCCTTGGCCGGCAAGGCGGTGAAGCTTTCCCCATCAACCCCAGAGCTTATAGTTGGAAGGATCTCCATGAGGAAAACTGTCACCAAGAAAGTATCATCTGGAAGCCCGTGGTATGGCCCAGACCGTGTCAAATACTTGGGTCCTTTCTCTGGCGAGGCCCCAAGCTACTTGACTGGTGAGTTCCCTGGTGATTATGGATGGGACACTGCTGGGCTTTCAGCTGACCCAGAGACATTCGCTAAGAACCGTGAGCTGGAGGTGATCCACTCTCGATGGGCTATGCTTGGAGCTCTAGGTTGTGTCTTCCCAGAGCTATTGGCTCGCAGTGGTATTAAATTCGGCGAGGCTGTGTGGTTCAAGGCTGGATCCCAAATCTTCAGTGAGGGTGGGCTTGACTACTTAGGCAACCCTAGCTTGATCCACGCCCAGAGCATCCTTGCCATTTGGGCTACCCAAGTTATCTTGATGGGTGCGGTTGAGGGTTACAGAATTGCTGGTGGACCTCTTGGTGAGGTCATTGACCCACTCTACCCTGGTGGCAGCTTTGACCCATTGGGCCTTGCTGATGACCCTGAAGCTTTTGCTGAGCTCAAACTCTTGGCTCGTAATGGTGTTAACTTCGGCGAGGCTGTATGGTTTAAGGCTGGATCCCAAATCTTTAGTGATGGTGGACTTGACTACTTGGGTAACCCAAGCTTGATCCATGCCCAGAGCATCCTTGCCATATGGGCTACCCAAGTTATTTTGATGGGTGCTGTTGAGGGTTATAGAATTGCTGGTGGGCCTCTTGGAGAGGTCATTGACCCACTCTACCCTGGTGGCAGCTTTGACCCATTAGGCCTGGCTGATGACCCGGAAGCTTTTGCTGAGCTCAAGGTGAAGGAGCTCAAGAATGGAAGGTTGGCCATGTTCTCAATGTTTGGTTTCTTTGTTCAAGCCATTGTCACTGGTAAGGGTCCCTTGGAGAACCTTGCTGACCACCTTGCAGACCCAGTCAACAACAACGCTTGGGCCTTTGCCACTAACTTCGTCCCTGAATGGACCAGTCAAACTATATTAAAACTGTAA 1101 0.5141 MAASTMALSSPSLAGKAVKLSPSTPELIVGRISMRKTVTKKVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARSGIKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGGPLGEVIDPLYPGGSFDPLGLADDPEAFAELKLLARNGVNFGEAVWFKAGSQIFSDGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGGPLGEVIDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPEWTSQTILKL 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g0208 366 Pfam Chlorophyll A-B binding protein 221 324 IPR022796 -
Lal7g0208 366 Pfam Chlorophyll A-B binding protein 64 210 IPR022796 -
Lal7g0208 366 SUPERFAMILY Chlorophyll a-b binding protein 211 355 - -
Lal7g0208 366 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 2, CHLOROPLASTIC 1 210 - -
Lal7g0208 366 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 2, CHLOROPLASTIC 210 356 - -
Lal7g0208 366 SUPERFAMILY Chlorophyll a-b binding protein 47 210 - -
Lal7g0208 366 Gene3D Chlorophyll a/b binding protein domain 210 351 - -
Lal7g0208 366 Gene3D Chlorophyll a/b binding protein domain 55 209 - -
Lal7g0208 366 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 210 356 IPR001344 GO:0009765|GO:0016020
Lal7g0208 366 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 210 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g0208 Lal-Chr7 2732292 2744684 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g0208 188 356 Chloroplast and Mitochondria Gene Families AT1G29930 77.604 3.34e-95 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g0208 K08912 - sly:101263969 635.18