Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g0165 ATGGAAGCAAGAGAAGGCATAAGTTCTGGTGTTACAGTGATAGGAGCTGAAGCTTCATCAGCTTATCATGTAGCACCAAGGAGTGAAGCTCCAAATCAGGTTCATGCCCCTGATGCAGCCGCCACTGCAGCCGCCACTGCTTTTGTTGTCTCGCCGGTGAGTGTGGGGTTGGATGGAACAGCAGTTAAGAAGAAACGCGGTAGACCTAGGAAATACGGGCCAGATGGGTCCGTTACTACTACGGCGTTGTCACCAATGCCAATCTCATCTTCAGGTCTACATTCTAATGACTTTTCATCCGGAAAGCGGGGAAAGCTATGGGGAATGGAATACAAGCAGTCGAAAAAAGTTGGGCTTGATCATCCAGGTGACTTTAATGCATACTCTCACGGTACAAACTTTATGACACATGTCATCACTGTCAATGCAGGCAAGGACATTACGATGGAGGTTATATCCTTTTCGCAACGAGGACCTCGAGCTATATGCATCTTGTCTGCTAATGGTTTCATTTCAAATGTTACACTTCGTCAACCTGATTCTTCTGGCGGTACTTTGACCTACGAGGGCCATTTTGAGATACTGTCATTATCTGGATCATTCATGCCTTCCGACAACCAAGGAACAAGAAGCAGGTCGGGTGGGATGAGTGTCTCGCTAGTAAGCCCCAATGGCCGTGTTGTCGGCGGAAGTGTTGCTGGTCTTCTTGTAGCTGCTGGTCCGGTGCAAGTGGTGGTAGGGAGTTTTTTACCGAGCAACCAGCAAGATCAGAAACCGAAGAAGTCGAAACCTGATTATGCACCGACAACTGTTACTCAAGCTATTGTTGTGTCTTCTGCACCACCCCCAACTAATGCTGAAAAAGAAGATGCCATGGTTGGACATGTACTGCAAAACTCGGGAAACCTTAACTCGAGCCTTAATCAATCCTCCGCGTTTAGAAGAGAAAACTGGGTTAACATGCACGGTATGCCAGACTCGAGAAAATCAGCAACTGACATTAACATATCATTGCCCGATAGTTAA 1026 0.4698 MEAREGISSGVTVIGAEASSAYHVAPRSEAPNQVHAPDAAATAAATAFVVSPVSVGLDGTAVKKKRGRPRKYGPDGSVTTTALSPMPISSSGLHSNDFSSGKRGKLWGMEYKQSKKVGLDHPGDFNAYSHGTNFMTHVITVNAGKDITMEVISFSQRGPRAICILSANGFISNVTLRQPDSSGGTLTYEGHFEILSLSGSFMPSDNQGTRSRSGGMSVSLVSPNGRVVGGSVAGLLVAAGPVQVVVGSFLPSNQQDQKPKKSKPDYAPTTVTQAIVVSSAPPPTNAEKEDAMVGHVLQNSGNLNSSLNQSSAFRRENWVNMHGMPDSRKSATDINISLPDS 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g0165 341 Gene3D - 135 265 - -
Lal7g0165 341 MobiDBLite consensus disorder prediction 61 96 - -
Lal7g0165 341 MobiDBLite consensus disorder prediction 77 96 - -
Lal7g0165 341 PANTHER AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN 1 340 - -
Lal7g0165 341 CDD DUF296 136 249 IPR005175 -
Lal7g0165 341 ProSiteProfiles PPC domain profile profile. 131 272 IPR005175 -
Lal7g0165 341 SUPERFAMILY AF0104/ALDC/Ptd012-like 134 252 - -
Lal7g0165 341 Pfam Plants and Prokaryotes Conserved (PCC) domain 136 249 IPR005175 -
Lal7g0165 341 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 1 340 IPR039605 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g0165 Lal-Chr7 1948081 1954169 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g0165 6 280 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 54.125 1.95e-91 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g0165 - - gmx:100793726 472.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g0165 7 1948081 1954169 Lal7g0165 7 1948081 1954169 ECH
Lal14g0886 14 11228481 11233314 Lal7g0165 7 1948081 1954169 LSH
Lal7g0165 7 1948081 1954169 Lal19g0235 19 2315511 2319820 LSH
Lal9g1736 9 19564912 19573499 Lal7g0165 7 1948081 1954169 PCT
Lal7g0165 7 1948081 1954169 Lal9g1736 9 19564912 19573499 PCT