Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g0162 ATGGATCCTGTAACAGCACAAGGACGTAATCTACCACCTCCTTTCTTGAGTAGAGATCTTCATCTACACTCTCACCATCAATTCCAACACCACAATAACCAAAACAGTGAAGATGAACAAAGTGGTAATGGGAATTTAAGCCAAGGGCAGAAGCGAGATCGAGATGAAAACGACGGCGCCAACACTCCAACAAACGCTGCCGGTGCTTCTGCGGCAGAAGGCAAGGAGCCAGGCTCAGGGATAAGTGGAGGAGAAGGTAGTGAGATGGGTAGAAGACCAAGAGGAAGACCTGCAGGTTCAAGAAACAAGCCTAAGCCACCAATCCTCATTACTAGGGACAGTGCAAATGCCCTAAGATCTCATGTCATTGAAATCGCCAATGGATGTGACATAATGGATACTATTACCAATTTCGCACGGAGGAGGCAGCGTGGTGTCTGCATCCTCAGTGCGAGTGGTACTGTAACCAATGTCACTCTTAGACAACCAGCTGCGCCGGGTGCAGTTGTGACCTTACATGGAAGATTTGATATCATGTCCTTGTCCGGATCCTTTTTGCCACCCCCGGCGCCTCCTGCAGCGTCGGGGCTAGCAATATATCTGGCTGGGGGACAAGGACAGGTAGTTGGTGGGAGTGTTGTGGGTCCACTTCTAGCTTCAGGCCTAGTGGTCATCATGATTGCTTCCTTTGGTAATGCAGCTTATGAGAGGCTGCCCTTGGAAGATGAGGAAACTCCGGTGGCGGTTCCGGGGAGCAGCGGGTTAGGTTCACCAGGAATTGTGGGTCAACAGCAACCGCAGCAGCAACAACAACAACTTGTATCGGATCCTAACAATTCACTATTCCATGGAGTGCGTCAAAATCTTATGAATTCATGCCAATTACCAGCCGAGGGTTATTGGAGTGGTTGTGCTCGCCCTCCATTTCAGTAA 933 0.4973 MDPVTAQGRNLPPPFLSRDLHLHSHHQFQHHNNQNSEDEQSGNGNLSQGQKRDRDENDGANTPTNAAGASAAEGKEPGSGISGGEGSEMGRRPRGRPAGSRNKPKPPILITRDSANALRSHVIEIANGCDIMDTITNFARRRQRGVCILSASGTVTNVTLRQPAAPGAVVTLHGRFDIMSLSGSFLPPPAPPAASGLAIYLAGGQGQVVGGSVVGPLLASGLVVIMIASFGNAAYERLPLEDEETPVAVPGSSGLGSPGIVGQQQPQQQQQQLVSDPNNSLFHGVRQNLMNSCQLPAEGYWSGCARPPFQ 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g0162 310 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 18 4 309 - -
Lal7g0162 310 Gene3D - 118 248 - -
Lal7g0162 310 CDD DUF296 119 186 IPR005175 -
Lal7g0162 310 Pfam Plants and Prokaryotes Conserved (PCC) domain 119 231 IPR005175 -
Lal7g0162 310 PIRSF ESCAROLA 16 309 IPR014476 GO:0003680
Lal7g0162 310 SUPERFAMILY AF0104/ALDC/Ptd012-like 115 250 - -
Lal7g0162 310 MobiDBLite consensus disorder prediction 257 275 - -
Lal7g0162 310 ProSiteProfiles PPC domain profile profile. 115 253 IPR005175 -
Lal7g0162 310 MobiDBLite consensus disorder prediction 34 48 - -
Lal7g0162 310 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 4 309 IPR014476 GO:0003680
Lal7g0162 310 MobiDBLite consensus disorder prediction 245 275 - -
Lal7g0162 310 MobiDBLite consensus disorder prediction 1 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g0162 Lal-Chr7 1882020 1882952 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g0162 1 309 AT-hook Motif Nuclear Localized (AHL) Family AT2G45430 60.615 7.16e-83 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g0162 - - jre:108980480 389.037