Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g0119 ATGGAATGCGAAGAAACCGCCACTCCGGTCGACCTCGACGGCGGAGACACTGGAAGCGGCGACGAAGGTTTGGTGGCGTTAGGCGGTGGAACCAGAGACAGAATAAAAGGTCCTTGGTCTCCTGAAGAAGACGCCATTCTTAGCCGCCTCGTGAGCAAATTCGGTGCTAGAAATTGGAGCCTCATTGCTCGCGGAATTTCTGGAAGATCAGGCAAATCTTGTCGCCTCCGTTGGTGTAATCAACTTGATCCTATCGTTAAGCGCAATCACTTCACTATACCATTCCGTTTGCATTTTCCAGCAGCATTAACCCATCCCGTATCCAAATTTCCATGTGAGTTGGTGGCACCTGCTGGTGAAGTGGAAGAATCTGAATCAATTGAACTTGGGAATGTTAATTTTCCATGCAAGCCAGGGAAATGGGCTTCCACATTTGAAATGGGTTGTCACTTGTCAGAAATTGGTGCAAGACCAATTAACCTGTGGCTTGTTACTAGTCACTTTAGCTGGTTGATTGACATGGTTGAGGCTGAGTCTGAGAAATTAGAGTCAGTTGGGCAGTTAGTTGGCAGATACCAGTGTTTATCACTGGTATCAGAGCACCATCCTGGTGCCTGCAAGGGAGAAAAGGGCCACAACACACCACGAAGCTGCTGGAATTTTATGGTATCAACAAGAAGTCAAACCAGAGACATGGATAGCTGGTTGCAAGAAAAGGAAGAACTCAGGTTGGAATGGGAGGAGGTGAGAGCTAGGCTGGAATTGAATGAAGCCAGAACTAAGAAAATTGAGGACTTCATGGCTGCCATAGCTATGAAGTTAGGGATATCCAGAGATGAGGAGAGCAGTGAGAGTCATGCAGACCTAAATAACTCTCATTCCAACATGAATCAGGATAGATGGAGGAAGTTGGAAATTCCCATTTTTATGGGAGATGATGCTTATGATGAGGAAGACCAGATCATAGTTGCTGCTCATGCAGTCCATGGGAACAAATGGGCAGCCATTGCCAGGCTTCTACCAGGAAGAACAGATAATGCCATTAAGAACCACTGGAATTCCACCTTGAGGCGTCGGGGAGTTGAACATGATAAGATTAAGTTAGAATGTGGTAACATAGTTGAAGATGTTAGCTTCGACAAAACTAAAGCATCATCGGAAGACACTCTATCATGTGATGTTAATTCCTTGAAATCCTCAGAAGGAAGAGATATCAGTTCTATGGAGGTCATGGATGATAAATATGAAGACCGAGCACGAACTGAGGGACAATTATACCATGAAGTCAAGGATCCACCTACCCTTGTTCGGCCACTAGCACGTGTTAGTGCTTTTAGTGTATATCACTCTTTTGATGGTTTGCAACCATCAACATCAGTTCAAAGACCTATTCCGATGCATGGACCCATTTTACAGTCATCCAAACCAGAGAATGAAATTTGTAAAATGATTGAAGGAATTTATGGTGACCGGTCAGTGCCTCACCAGTGTGGTCACGGTTGCTGCGCTGCTCCAAATGGTAACAATTCCAAAAGCTCTTTGTTGGGACCAGAATTCATTGAATTTTCGGAACCTCCATCTTACCCAAGTTTTGAGTTGGCTGCAATAGCTACAGACATTAGTAACCTTGCTTGGCTTAAAGGTGGATTGGAGAATAGTAATATCAAAATGATGGGTGACACATCTAGCAGGAGAATGTGTAATGGATCTGAAGTGCATATTGGCCATTAG 1731 0.4448 MECEETATPVDLDGGDTGSGDEGLVALGGGTRDRIKGPWSPEEDAILSRLVSKFGARNWSLIARGISGRSGKSCRLRWCNQLDPIVKRNHFTIPFRLHFPAALTHPVSKFPCELVAPAGEVEESESIELGNVNFPCKPGKWASTFEMGCHLSEIGARPINLWLVTSHFSWLIDMVEAESEKLESVGQLVGRYQCLSLVSEHHPGACKGEKGHNTPRSCWNFMVSTRSQTRDMDSWLQEKEELRLEWEEVRARLELNEARTKKIEDFMAAIAMKLGISRDEESSESHADLNNSHSNMNQDRWRKLEIPIFMGDDAYDEEDQIIVAAHAVHGNKWAAIARLLPGRTDNAIKNHWNSTLRRRGVEHDKIKLECGNIVEDVSFDKTKASSEDTLSCDVNSLKSSEGRDISSMEVMDDKYEDRARTEGQLYHEVKDPPTLVRPLARVSAFSVYHSFDGLQPSTSVQRPIPMHGPILQSSKPENEICKMIEGIYGDRSVPHQCGHGCCAAPNGNNSKSSLLGPEFIEFSEPPSYPSFELAAIATDISNLAWLKGGLENSNIKMMGDTSSRRMCNGSEVHIGH 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g0119 576 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 316 360 IPR017930 -
Lal7g0119 576 Pfam Myb-like DNA-binding domain 36 82 IPR001005 -
Lal7g0119 576 Pfam Myb-like DNA-binding domain 317 355 IPR001005 -
Lal7g0119 576 SMART sant 310 358 IPR001005 -
Lal7g0119 576 SMART sant 35 84 IPR001005 -
Lal7g0119 576 SUPERFAMILY Homeodomain-like 316 358 IPR009057 -
Lal7g0119 576 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 31 86 IPR017930 -
Lal7g0119 576 MobiDBLite consensus disorder prediction 1 23 - -
Lal7g0119 576 Gene3D - 35 87 - -
Lal7g0119 576 PANTHER - 8 91 - -
Lal7g0119 576 PANTHER - 313 553 - -
Lal7g0119 576 CDD SANT 38 80 IPR001005 -
Lal7g0119 576 SUPERFAMILY Homeodomain-like 32 92 IPR009057 -
Lal7g0119 576 CDD SANT 316 356 IPR001005 -
Lal7g0119 576 PANTHER MYB PROTEIN-RELATED 8 91 - -
Lal7g0119 576 PANTHER MYB PROTEIN-RELATED 313 553 - -
Lal7g0119 576 ProSiteProfiles Myb-like domain profile. 31 82 IPR001005 -
Lal7g0119 576 ProSiteProfiles Myb-like domain profile. 316 356 IPR001005 -
Lal7g0119 576 Coils Coil 232 259 - -
Lal7g0119 576 Gene3D - 315 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g0119 Lal-Chr7 1301566 1307278 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g0119 23 92 MYB Transcription Factor Family AT3G09230 69.014 4.29e-25 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lal7g0119 Myb_DNA-binding 2.2e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g0119 K09422 - gmx:100813406 430.254