Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g0118 ATGTCATCAAATATACAAATACAAATGATGTCTCATGTTGATTTGGAACAACAACATTCTATGACTGAAACTGACATAAGCCTATGTTTCTCTGATGCTGATAATGATGATGATGGTTGCTCTTGTTATTCCCAATTTTATTCAACAAATGGTGGATCATATGATGATGAATACACATCATCTAGTGTTTCTGATATTGAAGTTGGGTATGTTGATAATGATTCTAGAAGGGTTTCTTCTGTTACTGATTGTTGTGTTGAAATGAAGGAATGTAGAATATGTCAAATGGGATTGGAAAGTGATAGTGATGAATGTGGAGTTCCAATTGAATTGGGTTGTTCTTGTAAAGGTGATTTAGCATTTTCTCACAAGAATTGTGCAGAGGCTTGGTTCAAGATTAAGGGCAATTGGACATGTGAAATTTGTCATTGTGTTGCACATAACATTTGTGGAGAAAATTCAGAGACAAGAGAGAGTTTAAGTGACAATAATAATAATGTTACTAATGAAGCTTCTACAATCACAACACCTTCTGCTCCATCTTCAGAAACTACAAGATTTTGGCATGCCCAACGTTTCCTTAATTTTCTACTTGCTTCTATGGTTTTTGCATTTGTTATATCTTGGCTTTTTCACTTTAATTTGCCCCAATAA 654 0.3394 MSSNIQIQMMSHVDLEQQHSMTETDISLCFSDADNDDDGCSCYSQFYSTNGGSYDDEYTSSSVSDIEVGYVDNDSRRVSSVTDCCVEMKECRICQMGLESDSDECGVPIELGCSCKGDLAFSHKNCAEAWFKIKGNWTCEICHCVAHNICGENSETRESLSDNNNNVTNEASTITTPSAPSSETTRFWHAQRFLNFLLASMVFAFVISWLFHFNLPQ 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g0118 217 Pfam RING-variant domain 91 142 IPR011016 GO:0008270
Lal7g0118 217 PANTHER ZINC FINGER, RING-CH-TYPE 10 216 - -
Lal7g0118 217 ProSiteProfiles Zinc finger RING-CH-type profile. 83 149 IPR011016 GO:0008270
Lal7g0118 217 PANTHER OS01G0850200 PROTEIN 10 216 - -
Lal7g0118 217 MobiDBLite consensus disorder prediction 161 180 - -
Lal7g0118 217 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 86 146 IPR013083 -
Lal7g0118 217 SMART ringv_2 90 143 IPR011016 GO:0008270
Lal7g0118 217 CDD RING_CH-C4HC3_MARCH 91 143 - -
Lal7g0118 217 SUPERFAMILY RING/U-box 88 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g0118 Lal-Chr7 1292660 1297875 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g0118 48 216 C3H Transcription Factor Family AT5G05830 44.624 1.22e-45 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g0118 - - lang:109340912 351.673