Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g0115 ATGATAGTTGCAATGGACTTGAATGCCTCGCCGGTCCCGGAAGAAGAGGAAGATAATTTTGAAGGACATACCGTCGAAGAGTATTCTGCAACAGAAGAACGTGTGGAAAGTGCAGTTGATATAGCACGCCGGGAGCGTGAAGAAAGAAAAAGACGATTGAAGAGAGAACGTCCAGATGAGAAGCCTGTGCATGTATCACAGTCACCTGGATATGATCAGTTGTTGCCTACTAAGACCCTTAAATCATATGAGAGTAGCAGGCTTCCTCCAGGGTGGTTGGATTGCCCTTCATTTGGCCAGGAGATTTGTTACATGGTACCGTCTAAGGTTCCACTTGGTGAATCATTCAATGACTGCATTTTTCCTGGTAAAAGATACTCATTTAAACAAGTGATACATCAACAGAGAGTTTTAGGGAGAAAACTTGGACTTGTGATTGATTTAACAAATACTTCTCGATACTATCCTGTGTCAGATTTAAAAAAAGAGGGTATCAAGCATGTTAAGATTCAATGCAAGGGGCGTGATTCTGTACCTGATAATTTAGCTGTGAATCAGTTTGTCTATGAGGTTACTCAATTTCTTGTACGTCAAAAACACTCGAAGAAGTATATTCTCGTTCATTGTACACATGGGCACAATCGTACTGGATATATGATCGTCCATTATCTGATGCGTTCTATGTCAATGTCTGTTACTCAGGCAATAAAAAAATTTGCTGACGCACGCCCTCCAGGAATCTACAAACCTGATTACATTGATGGATTGTACACATTTTATCATGAAAAGAAGCCTGAAATGGTAGTTTGTCCTCCTACTCCTGAGTGGAAGAGATCTTCTGAACTTGACCTCAATGGTGAAGCAATTCCAGATGATGATGATGATGGAATACTAGACCCTCAATTGCATAATTTCTACATTATAAAGTTGATACTTGATACTGGGAATAAGTTGTTTGATGTGCTGGATGAATCTTGGGTGTGCCCCTTCACTTTGAAGCATTTTTGTTTGCTTTGTTATGAAGGTAAAGACATGGAAGGAGAGACAGCTTGTAAAGGAGCAGAAGGGGGTGGGGATGGAGGTGAAGGAGGAGGATCTGTGGCTGAGGCCATTAGAGCCACCTTTTCGGTTGCTGGTGGTGTTGTGGGCATCACATCCTATTTCCTAGGTAGGATCTGTCCTCACTTTCTGCAGTCTGAGAACCACGAGACTGACACACTAATGACAAATGATGACGTTTTGGGAGATGAAATACCTACTGAGCAACAAGAAGCATTCCGTCAGTTCTGTTATCAATCACTTAAATTGGGTGTTGGGGCTAGAGGACACGCACAATTTCCAGGTTCACATCCCGTTTCTCTTAACAGGGATAATTTGCAGTTGCTACGACAGCGTTATTATTATGCGACATGGAAAGCTGATGGTACACGATATATGATGCTTATAACTATGGATGGATGTTACTTAATTGACAGAAATTTCAACTTTCGAAGGGTCCAAATGAGGTCAGGATCCAGAGCAACCAAATTTCTTAGCTTGTTATTCACTTATGCAAAGTCCTTTGTCATGTTCTCCACAACATCTCCTAAACTCAACCGACTTCTATACAAAGAATTGAACTTTCACATCTCTGTATTCATTCGCTCCATGTACCGCACCAATTTCTCCACCCTTGGGTCCATCCTCTTCGAAGGCAACCAGCAGGCTTCTCATTCTTCATTTGTACTTCGCATTTTCCAGCCTATCCCCTTAGAAGTTCCCAAGTTGGCTATATTTGGTTTGGGCGAGAAGACCCACCACTTCACATTACTTGATGGTGAGATGGTTATTGATACATTGCCAGATTCACATAAGCAGGAGAGAAGATACCTTATATATGACATGATGGCAATCAACCAAGTATCCATAATAGAGCGACCCTTCTATGAACGGTGGAAAATGCTAGAGAAAGAAGTGATTGAACCTAGGAATCAGGAACGGCAGAATGGATACAAAAGCAAAAATCCTTACTATAGATATGACCTGGAACCATTTAGGGTGAGGAGGAAAGATTTTTGGTTGCTGTCTACTGTCAATAAGCTTTTAAAGGAATTCATTAAAAGACTCTCACATGAGGCAGATGGTCTCATATTTCAGGGTTGGGATGATCCTTATGTACCTCGTACTCATGAAGGCCTCTTAAAGTGGAAATATGCGGAGCTGAATTCAGTTGATTTTCTCTTTGAGGTTGATGGTGATCGTCAGCTACTTTATATCTATGAACGAGGAAAAAAGAAACTCATGGAAGGGAATACAGTTGCATTCGGAGATGGTTCAGATCCCTCGCTTTATTCTGGGAAGATCATAGAGTGTTCTCGGAATCCTGATACACAGGAATGGGTATTCATGCGAATCAGGACAGATAAATCTAATCCAAATGAGTTTAATACATACAAGAAGGTGTTGCGAAGTATAAGAGACAACATCACGCAGGATGACTTGTTGGATGAAATAAATGAGATAATTCGCCTTCCCATGTATGCTGACCGGATACAAATTGATAGCAAAGCCAATCAGCATGCTGCGATGGCTCGACGAAGGTGA 2583 0.4139 MIVAMDLNASPVPEEEEDNFEGHTVEEYSATEERVESAVDIARREREERKRRLKRERPDEKPVHVSQSPGYDQLLPTKTLKSYESSRLPPGWLDCPSFGQEICYMVPSKVPLGESFNDCIFPGKRYSFKQVIHQQRVLGRKLGLVIDLTNTSRYYPVSDLKKEGIKHVKIQCKGRDSVPDNLAVNQFVYEVTQFLVRQKHSKKYILVHCTHGHNRTGYMIVHYLMRSMSMSVTQAIKKFADARPPGIYKPDYIDGLYTFYHEKKPEMVVCPPTPEWKRSSELDLNGEAIPDDDDDGILDPQLHNFYIIKLILDTGNKLFDVLDESWVCPFTLKHFCLLCYEGKDMEGETACKGAEGGGDGGEGGGSVAEAIRATFSVAGGVVGITSYFLGRICPHFLQSENHETDTLMTNDDVLGDEIPTEQQEAFRQFCYQSLKLGVGARGHAQFPGSHPVSLNRDNLQLLRQRYYYATWKADGTRYMMLITMDGCYLIDRNFNFRRVQMRSGSRATKFLSLLFTYAKSFVMFSTTSPKLNRLLYKELNFHISVFIRSMYRTNFSTLGSILFEGNQQASHSSFVLRIFQPIPLEVPKLAIFGLGEKTHHFTLLDGEMVIDTLPDSHKQERRYLIYDMMAINQVSIIERPFYERWKMLEKEVIEPRNQERQNGYKSKNPYYRYDLEPFRVRRKDFWLLSTVNKLLKEFIKRLSHEADGLIFQGWDDPYVPRTHEGLLKWKYAELNSVDFLFEVDGDRQLLYIYERGKKKLMEGNTVAFGDGSDPSLYSGKIIECSRNPDTQEWVFMRIRTDKSNPNEFNTYKKVLRSIRDNITQDDLLDEINEIIRLPMYADRIQIDSKANQHAAMARRR 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g0115 860 MobiDBLite consensus disorder prediction 23 63 - -
Lal7g0115 860 Pfam mRNA capping enzyme, catalytic domain 596 730 IPR001339 GO:0004484|GO:0005524|GO:0006370
Lal7g0115 860 Pfam mRNA capping enzyme, catalytic domain 450 501 IPR001339 GO:0004484|GO:0005524|GO:0006370
Lal7g0115 860 ProSitePatterns Tyrosine specific protein phosphatases active site. 207 217 IPR016130 GO:0016311|GO:0016791
Lal7g0115 860 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 412 731 - -
Lal7g0115 860 PANTHER MRNA-CAPPING ENZYME 588 860 - -
Lal7g0115 860 PANTHER MRNA-CAPPING ENZYME 399 509 - -
Lal7g0115 860 PANTHER MRNA-CAPPING ENZYME 3 323 - -
Lal7g0115 860 ProSiteProfiles ATP-dependent DNA ligase family profile. 623 786 IPR012310 GO:0003910|GO:0005524|GO:0006281|GO:0006310
Lal7g0115 860 SUPERFAMILY Nucleic acid-binding proteins 733 844 IPR012340 -
Lal7g0115 860 Gene3D Protein tyrosine phosphatase superfamily 84 296 IPR029021 -
Lal7g0115 860 Gene3D DNA ligase/mRNA capping enzyme 409 730 - -
Lal7g0115 860 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 88 277 IPR029021 -
Lal7g0115 860 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 185 254 IPR000387 GO:0016311|GO:0016791
Lal7g0115 860 Coils Coil 25 45 - -
Lal7g0115 860 PANTHER MRNA (GUANINE-N(7)-)-METHYLTRANSFERASE-RELATED 3 323 - -
Lal7g0115 860 PANTHER MRNA (GUANINE-N(7)-)-METHYLTRANSFERASE-RELATED 588 860 - -
Lal7g0115 860 PANTHER MRNA (GUANINE-N(7)-)-METHYLTRANSFERASE-RELATED 399 509 - -
Lal7g0115 860 Pfam mRNA capping enzyme, C-terminal domain 747 828 IPR013846 -
Lal7g0115 860 CDD Adenylation_mRNA_capping 438 731 IPR001339 GO:0004484|GO:0005524|GO:0006370
Lal7g0115 860 SMART dsp_5 122 262 IPR020422 GO:0006470|GO:0008138
Lal7g0115 860 MobiDBLite consensus disorder prediction 1 73 - -
Lal7g0115 860 Pfam Dual specificity phosphatase, catalytic domain 140 259 IPR000340 GO:0008138|GO:0016311
Lal7g0115 860 CDD RNA_5'-triphosphatase 91 257 - -
Lal7g0115 860 Gene3D - 771 837 IPR012340 -
Lal7g0115 860 ProSiteProfiles Dual specificity protein phosphatase domain profile. 110 266 IPR020422 GO:0006470|GO:0008138
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g0115 Lal-Chr7 1231216 1253156 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g0115 593 860 Protein tyrosine phosphatase (PTP) family AT3G09100 70.632 1.69e-124 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g0115 K13917 - gmx:100776633 515.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g0250 14 2863980 2878845 Lal7g0115 7 1231216 1253156 LSH