Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g0058 ATGAAGTGTTTTTATTACTTCAAAGACAAATCAAGGAGCAATAAGCAAATATCAGCACCTGAACTGAATTCATTACATGTTTTTACTAAGTCTTCATACTCATCGTCCGCTTTGTATCGCGGTATATCTGAACTATATGAGGAGAAGGCTCGCAATTTGCGGGCCTTCTCCTTCACAGAACTCAAGCGTGCAACAAATGATTTCGGCATGCTTCTTAAGATCGGAGAAGGCGGATTCGGGAGTGTATATAAAGGTTCAATCAAGCCTATTGAGGGGAATGGTGATACTCTTTTAGTTGCTATCAAAAAGCTTAACAAGGATGCATTACAGGGTCATAAGCAATGGTTGGCTGAAGTTCAGTTTCTTGGTGTTGTGGAGCACCCGAATCTTGTCAAGCTTATCGGATATTGTGCTTCGGATGACGAAAGAGGGATCCAGAGACTACTCGTGTACGAATACATGCCGAATAAAAGCTTAGAATCTCATCTTTTCGATAAAGCATACGACCCTCTTCCTTGGAAAACAAGACTTGAAATTGCACTTGGAGCAGCTCAAGGGTTAGCTTATCTCCATGAAGAATTAGAAGTTCAGGTGATATATCGAGATTTTAAATCGTCAAATGTATTACTTGATGCAAACTTAAAGCCGAAACTTTCTGATTTCGGACTCGCTCGGGAGGGGCCAGCTGCAGGGGATACTCATGTTTCCACTGCTGTGATGGGAACATATGGTTATGCTGCTCCAGATTACGTCGAGACAGGCCATCTCACTGCGAAGAGCGACGTGTGGAGTTATGGCGTCGTGTTATACGAAATCCTTACGGGCAGGCATTCGTTCGAAAGAAATAGGCCTAAAATGGAGCAAAAACTATTAGAGTGGATAAAACAGTATCCTGCTGACATCAAAAGGTTCGGATCGATAATCGATTCGCGACTCGAAGGACAATATTCGATTAGTGGAGCGCGAAAGGTGGCGAAGCTCGCGGATAGTTGTCTAAGTAAGAGCGCAAAAGACCGGCCGACAATGAGGGAAGTGGTTGAGAGATTGAAGCATATAATCCAAGATTATGATGAAGAAAACACTGCAGAGAAAAATGTTGAGGTACTAGAAAATGGTCTAGTTGAGTCTGAACAAAAGGTGAATCAATCAGATTCTTCAGTGTTATGGAAAAAGAGAATGGAACATCTTGAAAAACTTGGTGAGAATGTGGAAAGTGCTAGTAGAAGAAGATTTATGATTCTACAAAGAATCAATAATGTACCTTTATAG 1269 0.4153 MKCFYYFKDKSRSNKQISAPELNSLHVFTKSSYSSSALYRGISELYEEKARNLRAFSFTELKRATNDFGMLLKIGEGGFGSVYKGSIKPIEGNGDTLLVAIKKLNKDALQGHKQWLAEVQFLGVVEHPNLVKLIGYCASDDERGIQRLLVYEYMPNKSLESHLFDKAYDPLPWKTRLEIALGAAQGLAYLHEELEVQVIYRDFKSSNVLLDANLKPKLSDFGLAREGPAAGDTHVSTAVMGTYGYAAPDYVETGHLTAKSDVWSYGVVLYEILTGRHSFERNRPKMEQKLLEWIKQYPADIKRFGSIIDSRLEGQYSISGARKVAKLADSCLSKSAKDRPTMREVVERLKHIIQDYDEENTAEKNVEVLENGLVESEQKVNQSDSSVLWKKRMEHLEKLGENVESASRRRFMILQRINNVPL 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g0058 422 Gene3D Phosphorylase Kinase; domain 1 41 153 - -
Lal7g0058 422 CDD STKc_IRAK 74 352 - -
Lal7g0058 422 ProSiteProfiles Protein kinase domain profile. 68 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal7g0058 422 Pfam Protein kinase domain 73 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal7g0058 422 SUPERFAMILY Protein kinase-like (PK-like) 51 350 IPR011009 -
Lal7g0058 422 ProSitePatterns Serine/Threonine protein kinases active-site signature. 198 210 IPR008271 GO:0004672|GO:0006468
Lal7g0058 422 Coils Coil 359 379 - -
Lal7g0058 422 PANTHER OS07G0495150 PROTEIN 27 409 - -
Lal7g0058 422 ProSitePatterns Protein kinases ATP-binding region signature. 74 103 IPR017441 GO:0005524
Lal7g0058 422 Gene3D Transferase(Phosphotransferase) domain 1 154 376 - -
Lal7g0058 422 PANTHER OS01G0588500 PROTEIN-RELATED 27 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g0058 Lal-Chr7 567256 569940 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g0058 1 349 Glycoside Hydrolase AT3G07070 43.836 8.12e-92 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lal7g0058 Pkinase 2.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g0058 - - gmx:100781858 655.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g0058 7 567256 569940 Lal7g0058 7 567256 569940 ECH