Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g0056 ATGTCCTTCAATCAATCAAAATCGGATAAGAACGAAACTCTTCACCGGAAATCAGAGAGATCCACCAGCTTCAATCAGCACCGTGGTTCCTCTGCTTCATATGTCAAGGCCACTGCCGGTGGTGGCTCCGCCTCACTCTCCTCTAACCGGAGTTTTAACAAGAAGTCTAATAATGCACAAGGTGGGCAATCTAGGGTAAACTCTACCCCAGTGAACTCAACAGAGGCTAATAGAGGTCCGATTGCCCGTACAGTACAGAATGGTACCCATGTTCAACTGCAATCACATGGAGCACCTGATGCATCAGTTAAAACTAATCCATCTATCACACAGAGGAGCAGTACAGTTATTCCAAAAGCTCCTACTTCTCAACGGATGCCCCCCATGAGTTCTGATTCAGCCGCCCCTACTACCCCTGGAGATGCGTCCAAGGCATTCTCTTTCCAATTTGGATCCATCAGTCCCGAATTTATGAATGGGATGGCAATTCCAGCCCGCACTAGCTCAGCTCCACCTAATATAGATGAGCAGAAGCATGATCAGCTGTCATCTCCGTCACAAACATCATTGGTTTTCCCTCTTCTCCATGTGGCAAGTTCGATGCATATGATATATTGCTCCATCTTGAGGGGAGTGTTGGATATAGAACTGTTGAAGGGATCCAGATCTTGTGTTGATCAAGGTTCTTCTCGACTCCCGAGTCGTCCCGATTATTGGTTAAATGATGGTGGTGTCTTGTTGGGCCGCCATTCACCATCGACAACATTTAAGCATGCAAATAGCTTCTGCCATGGATGGTTAATTGTTGCTCCTCAGGACTCTTATAGATCTGTGCCTTCAGGGCCGACACCTCCTATTCCGAAGCAGCAGCAGCAGCGACCTTGGAAAGATGCAGTTATCACTGGCCAATCTATTGCTGGGGAGACTCATATAGGAATCAAGGGAAGGAAGGATCCTCAGGCATCAGCTTTAACCCCAGCAGGCCTGATTCAAAAGCCTTCTGTTCCCGTAACTGGGATTTCAATGCCAAATCCATATCATCAGTCACCGGCATCTTTACAGTTTGGTGGTCCTAATCAACAGATTCAACCTCAGGGTATGTCAACAACATCCCTCCACATGCCTATACATATGCCTATACCAATTGGAAATCCTGCCCAACTGCAACATGTTTATGTCCCTGGTCTTCAACCTCATCCAATGCATCACCAGGGGATAATGTATCAAGGCCAAAACATGAATTTTACTCATCCAATGGGTCATCAGCTTTCCCATCAGTTAGGCAACACAGGCATTGGCATAAGCCCCCAATATCCTCAGCAGCAACGAGGAAAATTTGCCATGTCTGGAAAAACTACTACTGTGAAGATTACTCATCCTGAGACACGCGAAGAGCACCAACGAGGGAAAAATGTCACTTCTAGAAAAACTACTACAGTGAAGATTACTCATCCCGAGACACACGAAGAGCTGAGGCTTGATAAAAAAACAGATGCTTATTCAGATAGTGGGACATCTGGTGTTAGGTCACATCCTAACATGCTTTCTCAGTCTCAGCCTGTTCAATCTCTTGCAGCTTCTCATTCTATGAACTATTATTCAAGTTCCTTTAATACAAGTTCTATATATTTTCCACCTCCTGCCTCTCTTCGACCAACAAGTAGCCAGATAACTCCTAAATCTCAATCACCGAAAATTAATTATCCAGTGAACCATGGTCACCAAAATGCAGGTTTCATGAATTCAGCTCTTGGCCCTCCTCCTGTCAATAACTCTAGCATTCCTAGTATTGGCAGTGTTGAAGCACATAATTCAGAAAGTTCCCGTGATGGGCTTAGGGCGCTGTCATCAACTCCATCTGGTGTAACTTCTGTAACTATTAAGCCAAGTGCTGCGTCTGCTGTTGTGGGCTCATCATTGCCCAATTCCAGTATTTCTGGTGTTCAAAATAGTGAATCTTGTTCAGCAGCATCTTGTGATACTAGCTCCTTTGTGCCACAAGAAGGATCTGAAACTTGTATAGAGAGCATTTCACAGCAGTCTAATTTAGCTATTAACTCTTCAGTTTTGGGTTCACTGCCAAAGCAATCTTCTGCATCTGTTGCTGTAACTGATGAGAAGCTTACAGCCACTCCCTTGATGCTTCCTTCATCAACTGCTACTGAGGATTCTGTCTCGGTTGTATCTAATAACGAAGGCAGAAGGGGGGAATCTCTTAGCAGGTCTAACTCTCCGAAGGACGATCAGAATAAACCATGGAAGAAAGGTCAACTGCAGCATCAGGTTTCTGTGAACTCTCCTACTGAGGCTACTGTGTTTTCTCGAGCTGTTGACAGTGGTATATCTGATACTGGAGTTTCCGAACCTACAGGAACTAAAACAAACTATTCCGTGGCAGTCAACACTGAAGATCTTCCATCATCTATTGATACAATATCAGCTAGCAGCAGTGGCATTCCTGGTGCTGTTGAAGTGAAGACCAAATGCTCTGCCGATGTTTCTGCTTGTGTTTCTGCTGAAGGATCTGATGTGCAAGAATCTAAACAAACTGAACAAGATGCTGCAATGGTAAGCACTGAGCCGATAACCTTGAAGACTGTACAGAAACAACAAGATGAATCTGCAAGTTGCAGCACAGGTGATCCTGAGTCTGCTGATCCTCCAGAAACAACATCAGTACATGTCAAGGATAGTTCGGAGATTGTTGGCAGTCACTCAATGTCTCATCCAGTGTCAGGTAACAAGGATAGACAAACTTCAGAAGCAAATAAGGTGAAAACTATACCCAAAGGAAAGAAAAAAATGAAAGAGATTCTTCAGAAAGTGGATGCTGCTGGGTTATCTTCTGATCTTTATAATGCATGCAAGGGACCTGAGGAAAAGAAAGAAGCTGTCATAAGTTCAGATATCACGGATAATGATTCTACTTCTGGAAGTTTGGAACAGTTGTCTGCTGATGCTGCTCAACCGGGTGCTTTATCAACTGAGAAACGTGGGGAGAATAAGGCTGAACCTGATGACTGGGAGGATGCTGCTGACATTTCTGCTCCATCACTTGATGTTGATAAATCACAAGTTAGTGATGAAACTGGAGGTACAGCCATTAAGTACTCTCGAGATTTCCTTTTGAAATTCTCTGAGAAATGCACTGATCTTCCTGAAGGTTTTGAAATCTCAGAAGACATTGCTGAGTCGTCTTTGATGAGCACTAATATTAGTAGTGGTCATGTTATTGAGCGTAACTCACATCCTAGTCCTGGAAGAAATGTAGCTTGGATGGATCACCGTGGAAGTGGTATGATTGAGGAAGACAGATGGAATAAAGTTTCTGGTGCTTTTCATTCTGGACGTGGTTTGGATGGTTTAGGAGGTAATGTGGGATTTCGAGCTGGCCAAGGAAGCAATTTTGGTGTTTTAAGGAATCCTCGTACACAGACACCTTTACAATATGCTGGAGGGATCCTTTCTGGGCCAACACAATCCATGGGAAATCAGGGTGGAATGCAAAGAAATAGCCCTGATGGTGATAGGTGGCAACGTTCTGCTAGCTTCCAGCATAGGGGTTTAATTCCTTCACCTTCAATTCCTCAAACACCTTTACAAATGATGCACAAAGCTGAGAAGAAGTATGAAGTGGGTAAAATATCAGATGAGGAACAGGCAAAGCAGAGGCAGTTGAAAGCTATCTTAAACAAACTAACCCCTCAGAATTTTGAGAGACTTTTTGAACAGGTAAAAGCAGTTAATATTGATAATGCAGTCACCCTCACTGGTGTGATCTCACAAATCTTTGAGAAAGCTCTGGTGGAGCCTACCTTCTGTGAAATGTATGCCAACTTCTGTTCACATTTGGCTTCTGCTTTGCCTGATTTCAGTGAGGACAATGAAAAGATTACATTTAAGAGATTATTATTAAACAAATGCCAAGAGGAATTTGAGAGGGGTGAAAAAGAACAAGAAGAAGCCAATAAGGCCGACGAGGGAGAGGTCAAACAATCTGATGAAGAAAGGGAAGAAAGAAGAGTCAAGGCTAGAAGACGTATGTTAGGTAACATCAGATTGATTGGAGAGCTATATAAGAAAAGAATGTTGACCGAGAGGATAATGCACGAGTGCATCAAGAAGTTACTGGGTCAGTATCAGGATCCAGATGAGGAAGATATTGAAGCATTGTGCAAACTGATGAGTACTATTGGTGAGATGATTGACCATCCCAAAGCCAAGGTGCATATGGATGCATATTTTGAAGGAATTAAGGTATTATCAAACAATATGAACTTATCCTCTAGGTTGAAGTTCATGTTGAAGGACACTATTGATTTGAGAAAGAATAAATGGCAACAAAGGCGGAAAGTTGAAGGTCCAAAGAAGATTGAGGAGGTACACAGAGATGCTGTGCAAGAGAGGCAAGTTCAAGCTCAAGTCGGTAGGATGGGTCGTGGTCCGGGCAACAATCCATCAGCTAGAAGGAACCACATAGATTTTGGTCCAAGAGGTTCATCAATGTTGTTTTCTCCTACTGCTCAGATGGGTGGACTGCGTGGGCCCCCTACTCCTACTCAAGTTCGAGGATATGGTTCTCAGGATGCTCGTTTTGAGGAAAGGCAATCTTACGAGGCTAGGACCTTGTCAGTTCCTCTGCCTCAAGGAATTTTAGGCAATGGTTCTATAACCCTGGGTCCCCAAGGTGGTCTTGCTAGGGGAATGTCGATTAGAGGATCGACTGTAATTCCACCTTCATCAGTTTCGGAGGGATTTCCTGGCCCTGGAGACTCTCATAGAATGGCTACTGGTTTTAATGGTCATAGCAATTTACCACAGCACGTGCCTTACAGTTCAAGGGAGAATCCTTCATCAAGATACATGATGGATAGGTTTTCTGGTCCAGGTTCTTCTGATAAATCAAGTGCTCTAGAGCGTAATATAAATTATGGTAACAGAGACTTGAGGAATGTAGAATGGAATCTCGACAGACCTGTTGGAACTTCTCCTTCTCAATTGCAAGGTTCAACAGTCTCCCAGAATGATTCTTCGGAGAAGGTACAGCCAGAAGAGCGACTGTGGGACATGTCCATGGCAGCAATCAAAGAATATTACAGTGGTGAATTTATTTCCAAATTATCTAGTCATTTAAATCCTCTTACTGGATCTTTTGAAATTTTCAGTGCTAGAGATGATAAGGAAGTTGCATTATGTATCAAAGAGTTGAACTCTCCAAGCTTTCACCCTTCTATGGTTTCTCTGTGGGTCACAGACTCATTTGAGAGAAAGGACACAGAAAGAGATCTTTTGGCTAAACTACTAGTCCACCTTGTGAAATCTCAGGATGCCACATTGACGCAAACCCATCTCATCAAAGGGTTTGAATCTGTTCTCAGTACATTGGAGGACGCAGTTAATGATGCCCCCAGAGCAGCCGAGTTTCTTGGTCATATTTTCGCCGAAGCTGTAAGAGAGAGTGTAGCCACTTTGAATGAAATCGGGCGGCTAATACATGAAGGTGGAGAGGAGCCAGGGAGTCTCTTGGAAGCTGGGCTTGCAGGTGATGTTTTGGGGTGGACCTTGGAGTGGATACAATTGGAGAAAGGGGAAGGTGTTCTGAATGAGATTCTTAAAAGCTCCAACTTGGTGTTGGAAACTTTTAGGTCACCTAATAATTCAATTACATCAAGGAAGTTAGAGAAATTTATTTAG 5694 0.4348 MSFNQSKSDKNETLHRKSERSTSFNQHRGSSASYVKATAGGGSASLSSNRSFNKKSNNAQGGQSRVNSTPVNSTEANRGPIARTVQNGTHVQLQSHGAPDASVKTNPSITQRSSTVIPKAPTSQRMPPMSSDSAAPTTPGDASKAFSFQFGSISPEFMNGMAIPARTSSAPPNIDEQKHDQLSSPSQTSLVFPLLHVASSMHMIYCSILRGVLDIELLKGSRSCVDQGSSRLPSRPDYWLNDGGVLLGRHSPSTTFKHANSFCHGWLIVAPQDSYRSVPSGPTPPIPKQQQQRPWKDAVITGQSIAGETHIGIKGRKDPQASALTPAGLIQKPSVPVTGISMPNPYHQSPASLQFGGPNQQIQPQGMSTTSLHMPIHMPIPIGNPAQLQHVYVPGLQPHPMHHQGIMYQGQNMNFTHPMGHQLSHQLGNTGIGISPQYPQQQRGKFAMSGKTTTVKITHPETREEHQRGKNVTSRKTTTVKITHPETHEELRLDKKTDAYSDSGTSGVRSHPNMLSQSQPVQSLAASHSMNYYSSSFNTSSIYFPPPASLRPTSSQITPKSQSPKINYPVNHGHQNAGFMNSALGPPPVNNSSIPSIGSVEAHNSESSRDGLRALSSTPSGVTSVTIKPSAASAVVGSSLPNSSISGVQNSESCSAASCDTSSFVPQEGSETCIESISQQSNLAINSSVLGSLPKQSSASVAVTDEKLTATPLMLPSSTATEDSVSVVSNNEGRRGESLSRSNSPKDDQNKPWKKGQLQHQVSVNSPTEATVFSRAVDSGISDTGVSEPTGTKTNYSVAVNTEDLPSSIDTISASSSGIPGAVEVKTKCSADVSACVSAEGSDVQESKQTEQDAAMVSTEPITLKTVQKQQDESASCSTGDPESADPPETTSVHVKDSSEIVGSHSMSHPVSGNKDRQTSEANKVKTIPKGKKKMKEILQKVDAAGLSSDLYNACKGPEEKKEAVISSDITDNDSTSGSLEQLSADAAQPGALSTEKRGENKAEPDDWEDAADISAPSLDVDKSQVSDETGGTAIKYSRDFLLKFSEKCTDLPEGFEISEDIAESSLMSTNISSGHVIERNSHPSPGRNVAWMDHRGSGMIEEDRWNKVSGAFHSGRGLDGLGGNVGFRAGQGSNFGVLRNPRTQTPLQYAGGILSGPTQSMGNQGGMQRNSPDGDRWQRSASFQHRGLIPSPSIPQTPLQMMHKAEKKYEVGKISDEEQAKQRQLKAILNKLTPQNFERLFEQVKAVNIDNAVTLTGVISQIFEKALVEPTFCEMYANFCSHLASALPDFSEDNEKITFKRLLLNKCQEEFERGEKEQEEANKADEGEVKQSDEEREERRVKARRRMLGNIRLIGELYKKRMLTERIMHECIKKLLGQYQDPDEEDIEALCKLMSTIGEMIDHPKAKVHMDAYFEGIKVLSNNMNLSSRLKFMLKDTIDLRKNKWQQRRKVEGPKKIEEVHRDAVQERQVQAQVGRMGRGPGNNPSARRNHIDFGPRGSSMLFSPTAQMGGLRGPPTPTQVRGYGSQDARFEERQSYEARTLSVPLPQGILGNGSITLGPQGGLARGMSIRGSTVIPPSSVSEGFPGPGDSHRMATGFNGHSNLPQHVPYSSRENPSSRYMMDRFSGPGSSDKSSALERNINYGNRDLRNVEWNLDRPVGTSPSQLQGSTVSQNDSSEKVQPEERLWDMSMAAIKEYYSGEFISKLSSHLNPLTGSFEIFSARDDKEVALCIKELNSPSFHPSMVSLWVTDSFERKDTERDLLAKLLVHLVKSQDATLTQTHLIKGFESVLSTLEDAVNDAPRAAEFLGHIFAEAVRESVATLNEIGRLIHEGGEEPGSLLEAGLAGDVLGWTLEWIQLEKGEGVLNEILKSSNLVLETFRSPNNSITSRKLEKFI 1897
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g0056 1897 MobiDBLite consensus disorder prediction 91 143 - -
Lal7g0056 1897 MobiDBLite consensus disorder prediction 585 624 - -
Lal7g0056 1897 MobiDBLite consensus disorder prediction 550 624 - -
Lal7g0056 1897 MobiDBLite consensus disorder prediction 866 918 - -
Lal7g0056 1897 MobiDBLite consensus disorder prediction 486 522 - -
Lal7g0056 1897 SMART if4_15 1223 1445 IPR003890 GO:0003723|GO:0005515
Lal7g0056 1897 MobiDBLite consensus disorder prediction 1656 1683 - -
Lal7g0056 1897 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4G-LIKE 76 468 - -
Lal7g0056 1897 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4G-LIKE 467 1886 - -
Lal7g0056 1897 Gene3D - 1718 1897 - -
Lal7g0056 1897 SUPERFAMILY ARM repeat 1719 1888 IPR016024 -
Lal7g0056 1897 MobiDBLite consensus disorder prediction 969 984 - -
Lal7g0056 1897 ProSiteProfiles MI domain profile. 1706 1832 IPR003891 -
Lal7g0056 1897 SMART ma3_7 1703 1823 IPR003891 -
Lal7g0056 1897 MobiDBLite consensus disorder prediction 1597 1620 - -
Lal7g0056 1897 MobiDBLite consensus disorder prediction 1658 1678 - -
Lal7g0056 1897 MobiDBLite consensus disorder prediction 739 754 - -
Lal7g0056 1897 SUPERFAMILY ARM repeat 1217 1447 IPR016024 -
Lal7g0056 1897 MobiDBLite consensus disorder prediction 866 932 - -
Lal7g0056 1897 Pfam MA3 domain 1720 1820 IPR003891 -
Lal7g0056 1897 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 467 1886 IPR045208 GO:0003743
Lal7g0056 1897 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 76 468 IPR045208 GO:0003743
Lal7g0056 1897 MobiDBLite consensus disorder prediction 550 578 - -
Lal7g0056 1897 MobiDBLite consensus disorder prediction 500 522 - -
Lal7g0056 1897 MobiDBLite consensus disorder prediction 1315 1341 - -
Lal7g0056 1897 MobiDBLite consensus disorder prediction 958 1029 - -
Lal7g0056 1897 Pfam MIF4G domain 1223 1445 IPR003890 GO:0003723|GO:0005515
Lal7g0056 1897 MobiDBLite consensus disorder prediction 9 23 - -
Lal7g0056 1897 MobiDBLite consensus disorder prediction 1 79 - -
Lal7g0056 1897 Coils Coil 1305 1325 - -
Lal7g0056 1897 MobiDBLite consensus disorder prediction 713 764 - -
Lal7g0056 1897 MobiDBLite consensus disorder prediction 1148 1179 - -
Lal7g0056 1897 MobiDBLite consensus disorder prediction 1578 1638 - -
Lal7g0056 1897 MobiDBLite consensus disorder prediction 460 479 - -
Lal7g0056 1897 MobiDBLite consensus disorder prediction 24 79 - -
Lal7g0056 1897 MobiDBLite consensus disorder prediction 713 738 - -
Lal7g0056 1897 Gene3D - 1223 1458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g0056 Lal-Chr7 528059 544392 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g0056 294 1896 Eukaryotic Initiation Factors Gene Family AT3G60240 45.554 0.0 1147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g0056 K03260 - gmx:100798562 1873.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g0137 14 1433830 1442884 Lal7g0056 7 528059 544392 LSH
Lal7g0056 7 528059 544392 Lal19g0036 19 283738 291929 LSH