Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g0048 ATGGATGAATATGGAACCCCAATCATTCTCTCTAAATTACCCAACACCTCTGAAGATCAACCCTATGATCAAAACACCCTCATCACCAACGGTGGTGGTTCAGTTGCTTGGCCGTATCCCCACCAGATACCACCATCCTCCTCCACCGGCCACCATGACAACAACCTTGCTCTTGTGCCAGCACAGAAGAAACCTAGAGGTAGACCACAAGGTTCAAAGAACAAGCCAAAAACACCCACTACTGTGTTAACCCAAGACAGTGATGATAATTTGATGAAACTAGTGACCATTGAAATCTCTATTGGCTCTGATGTAGTTGAAGCTATAGTGAAATTTGCTCACCTACGCAATGTTTGTATCACAATTCTTAGTGGGTCAGGTTCCATTTCCAATGTTACCCTTCATAACCCTTTTCCACATTCTCCTTATTTTACCCTAAATGGTTCCTACACTTTGGTTTCTCTATGTGGAAGCTACATATCTAACCTTTCTGTTAACCCTTACCCTCTTATGGTTACACCATCTTCATCATCTTCTGCATTAATCCCTAATCATCCTTATTCAGATGGTGTTAACACTTTTGGGATTTCAGTTTTAGGGTCTCAGGGTGAGATTCTTGGTGGGGTTGTTGCTGGAAAAGTTGTGGCTGCATCTACTGTGACAGTCATAGCCACTGTGTTCAAGAAACCAGAGTTTCATAAGCTTGGAATTAATAATGTGAATGATGAAGTTAATGGAGGTGAAGAAGATTATAACTCAAATAATAATGGAAGTGGAAATGATAGCATGATGATGAGTAATAATTTTCTGAATCAACAAGTTCTTTATGGTAATGTGAATAATATGATCCAATAG 855 0.3988 MDEYGTPIILSKLPNTSEDQPYDQNTLITNGGGSVAWPYPHQIPPSSSTGHHDNNLALVPAQKKPRGRPQGSKNKPKTPTTVLTQDSDDNLMKLVTIEISIGSDVVEAIVKFAHLRNVCITILSGSGSISNVTLHNPFPHSPYFTLNGSYTLVSLCGSYISNLSVNPYPLMVTPSSSSSALIPNHPYSDGVNTFGISVLGSQGEILGGVVAGKVVAASTVTVIATVFKKPEFHKLGINNVNDEVNGGEEDYNSNNNGSGNDSMMMSNNFLNQQVLYGNVNNMIQ 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g0048 284 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 35 268 IPR014476 GO:0003680
Lal7g0048 284 MobiDBLite consensus disorder prediction 41 55 - -
Lal7g0048 284 Pfam Plants and Prokaryotes Conserved (PCC) domain 95 228 IPR005175 -
Lal7g0048 284 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 35 268 - -
Lal7g0048 284 MobiDBLite consensus disorder prediction 245 263 - -
Lal7g0048 284 MobiDBLite consensus disorder prediction 36 55 - -
Lal7g0048 284 ProSiteProfiles PPC domain profile profile. 89 252 IPR005175 -
Lal7g0048 284 SUPERFAMILY AF0104/ALDC/Ptd012-like 91 235 - -
Lal7g0048 284 CDD DUF296 97 227 IPR005175 -
Lal7g0048 284 MobiDBLite consensus disorder prediction 244 263 - -
Lal7g0048 284 MobiDBLite consensus disorder prediction 60 85 - -
Lal7g0048 284 MobiDBLite consensus disorder prediction 10 29 - -
Lal7g0048 284 Gene3D - 93 243 - -
Lal7g0048 284 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g0048 Lal-Chr7 430546 431400 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g0048 53 268 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 35.909 1.20e-32 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g0048 - - lang:109361806 241.121