Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g0041 ATGGCTGAAAATGGAAGCCCACTCTCTCAATATCAACATTCCAACACCTCTGAAGATGAATCCTCTGACCATAACAATGCCCTAACTATTAATGGTGATCATGGACCAAGTGATTGGTCTTGTCCCCACCATACACCACCACCCTCCTCCGTCAACAACCACTACCATCTTCTTCCACCACCACAAAAGAGACCTCGAGGTAGACCAGTAGGTTCTAAGAACAAGCCAAAACCACCCATCATAATCACCCAAGAGCATGAAGAGTTATTGAAACCAGTGCTTATCAAAGTCTCTATTGGCTTAGATGTGATGAAAACTTTGATAGATTATGCTCGTCAACGCAATGTTGGTATCTCAGTGCTTAATGGGTCAGGTTCCATTGCTAGTGTTACCCTTCACCACCCTCTTCATTCTTCTCCTTCTTTTACTCTCCATGGACCTTTCACTTTGTTGTCTCTTACTGGAACCTATTTCTCTGGTCCTTCTCATCCTTCTTTTCCTTCTTTAGCTCTTGTTGATACAACATCATCATCTTCTGCATCAAACCCTAATTCCTCTTGTTCCATTACTACTAGTTCTTTTGGGATTTCACTTTTAGGGTCTCAGGGTGAAATCTTTGGTGGGGTTGTTGCTGGGAAGATTGTGGCTTCATCTATTGTTACAATCACTGCCACTGTGTTCAAGAATCCAGAGTTGTACAACGTTGGATTTGATGAGAATGATGAAGATGGTGCTGGTGTTGGTGAAGAAGATCATAACCTTAATGCAAATGGCAATGGTACTATGACAAAATTTGTGAATCATAAACGTAATGTGAATCAATGGGGTCACATTCACTCTTCTACTCGCCCTAGAAATTACTGA 864 0.4167 MAENGSPLSQYQHSNTSEDESSDHNNALTINGDHGPSDWSCPHHTPPPSSVNNHYHLLPPPQKRPRGRPVGSKNKPKPPIIITQEHEELLKPVLIKVSIGLDVMKTLIDYARQRNVGISVLNGSGSIASVTLHHPLHSSPSFTLHGPFTLLSLTGTYFSGPSHPSFPSLALVDTTSSSSASNPNSSCSITTSSFGISLLGSQGEIFGGVVAGKIVASSIVTITATVFKNPELYNVGFDENDEDGAGVGEEDHNLNANGNGTMTKFVNHKRNVNQWGHIHSSTRPRNY 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g0041 287 ProSiteProfiles PPC domain profile profile. 87 251 IPR005175 -
Lal7g0041 287 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 14 269 IPR014476 GO:0003680
Lal7g0041 287 Pfam Plants and Prokaryotes Conserved (PCC) domain 91 228 IPR005175 -
Lal7g0041 287 CDD DUF296 91 227 IPR005175 -
Lal7g0041 287 SUPERFAMILY AF0104/ALDC/Ptd012-like 90 231 - -
Lal7g0041 287 Gene3D - 91 243 - -
Lal7g0041 287 MobiDBLite consensus disorder prediction 1 33 - -
Lal7g0041 287 MobiDBLite consensus disorder prediction 1 81 - -
Lal7g0041 287 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 14 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g0041 Lal-Chr7 333653 334516 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g0041 63 251 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 35.938 2.69e-35 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g0041 - - lang:109361806 310.457