Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g0030 ATGACAGATGGAACCTCCGGGCCGCGCTCGTTCCTCCGTGGAATAGACGTGAATGCAGCTCCGCCGCCGTCAATGGCGGTGGTTTCCGCCGGCGACGAGGAGAATGGAGAATCCTCTCCGAACAGCACAGTGTCAAGTATCAGCGGGAAGAGGACTGAGAGGGAAGCTAATGGAGATGACACCGATGCCGTGGAGAGGGCCTCATGTTCTCGAGGTGGCAGCGATGACGATGGTGGTGGTGGTGGTAATGGCGATGCCGATGGCGAAAATTCGAGGAAGAAATTAAGGTTGTCAAAGGAACAGGCCTTGGTGTTGGAACAAACATTCAACGAGCATAGTACTCTGAATCCGAAACAAAAACAAGCATTGGCAAATCAGTTGAATCTGCGGCCTAGACAAGTGGAGGTGTGGTTTCAGAATAGAAGAGCAAGGTGA 435 0.5264 MTDGTSGPRSFLRGIDVNAAPPPSMAVVSAGDEENGESSPNSTVSSISGKRTEREANGDDTDAVERASCSRGGSDDDGGGGGNGDADGENSRKKLRLSKEQALVLEQTFNEHSTLNPKQKQALANQLNLRPRQVEVWFQNRRAR 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g0030 144 PANTHER - 4 144 - -
Lal7g0030 144 Pfam Homeodomain 92 144 IPR001356 GO:0003677
Lal7g0030 144 ProSiteProfiles 'Homeobox' domain profile. 88 144 IPR001356 GO:0003677
Lal7g0030 144 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT3 4 144 - -
Lal7g0030 144 Pfam HD-ZIP protein N terminus 5 55 IPR006712 GO:0005634
Lal7g0030 144 Gene3D - 97 144 - -
Lal7g0030 144 SMART HOX_1 90 144 IPR001356 GO:0003677
Lal7g0030 144 MobiDBLite consensus disorder prediction 34 51 - -
Lal7g0030 144 CDD homeodomain 92 144 IPR001356 GO:0003677
Lal7g0030 144 SUPERFAMILY Homeodomain-like 76 144 IPR009057 -
Lal7g0030 144 MobiDBLite consensus disorder prediction 1 97 - -
Lal7g0030 144 MobiDBLite consensus disorder prediction 52 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g0030 Lal-Chr7 250879 253809 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g0030 9 144 Homeobox Transcription Factor Family AT3G60390 66.438 5.63e-54 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Lal7g0030 Homeodomain 2.7e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g0030 K09338 - gmx:100810641 182.956