Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g0028 ATGATGTTCACGAAATCAATACTACTACTCTACCGCCATGTCTCAACCACCACAGTTTTCTCAAAACTTCCTCCAAAGTCAAAGAAAATTGCTTTAACCCAAGCTCAACATGTTCTCACTGATTATCTTCATGCTACAAGATCTCTTCCTTATCCCTATGCTGATCAAATTGCAAAAAATTCATTCCTTTCTCTCTCTAATCTTATTTCCAAACTCCAAGGTGGTTCTTTTACTTTCAATTCCCTTGTTAAGTTCCTTAGGTACAACCCCATTAATGAGTTTGAGTTTTTCTTTGAGAGTATTGGTATTTCTTACTCTAAAGTTCATTCCTTTTTGCCTCATAACAAGTTCTTCTTTTCTGAAGATGGGTCTCTTCTTGATGCTGCTTCTGTGCTTTCTGAATTTGGGTTCCCTTGGGATAAGCTTGGTTTGTTGTATGTTGAAACTGGTGGGTCTGTGTTTAAGAGGAGTGTTGTTGAGTTGAAGGGTAGGCTTTGTTTTTTCAAAAGATATGGTTTTTGTAATGTTCAAGTCATTGGGATGTGTTTGGCTTTCCCTTTTCTTTTTCTTCATGAGGAGGAACAGGGTCAATTTCATGGGTTGTTGGATGATTTGAAGTTGGTTTTCTTGGATTTTGATTTAGCTGGGTCTGTTGAGGGGAGTGTGGATTCATGGTATGAGGTGTGTAGGAAAATTCGGGTTTTTTACGATTTGAATGATGATGGGAAGTATAATATAGGGGAACTCATTGGGAGGAATAAGAGTGTCATTCTTGAGCATGGAGAAGAGGAGTTGATTCGCAAAGTCGAGTACTTTTGTAAATTTGGTGTGAAGAAGGAGGAAGTAGCTCTGTTGATTCTACAGGGTTCGGAGTTGTTGAATATTAATTTGGAGACGCCGGTGATTAATGTATTGAAGCTGTTGAAACACGTTGGTCTAAGCTCTGAAGATCTCGAGGATGTAAGACGGAATTATGGTCATGTGTTGGGAACAATTAAAATGTCGAATCTTCCTAGTGTAATGAGGGCTTTGGGTTTACATGAGTGGTTCTTTAATAAACTCAAGGATGGGGATCATCAATTGTTAATGAGTTATATCACAACCTATCCAAATGAAGACCAAGATAAAGATTATCTACGCGGTTTAGAGACGATCCGTGTTTCAAGAACCCCGATTCACAATATGAATAAATTGAATTTCTTGCATGCCTTGGGCTTTGGAGAAAATGGTTTCACCATGAGTATCTTAAATGACTTGCATGGAAATGTTAGTGAGTTACAGGAACGATTCGATTGCCTCATGAATTCAGGGATTGAATTCTCAAAGGTTTGTAAGATGATCACTATTCGACCAAGGATTCTAAGCCAAAACCCTGAAATTTTAGTGCAGAAGATTAATTTTCTCTGTCAGGAAATGGGAAATAACATAGAGATTTTGGTCGCTTTCCCGGCATTCTTATGTCATGATTTAGAGAGCCGCATTAAGCCTAGATACAGATTCCATATGTGGGTTAAAGAAAGGGGTCTGACTAAGAAAAACTATTCCATTGCGAGCATGATTGCAACCAGCAACAAGAATTTCGTTGCTCGTATTTCTAGAATTCACCCAGCTGCTCCAAAACATTGGTTTGAGCAATTCTATCCTAGCAAATTGGCATCAGAATGA 1665 0.3838 MMFTKSILLLYRHVSTTTVFSKLPPKSKKIALTQAQHVLTDYLHATRSLPYPYADQIAKNSFLSLSNLISKLQGGSFTFNSLVKFLRYNPINEFEFFFESIGISYSKVHSFLPHNKFFFSEDGSLLDAASVLSEFGFPWDKLGLLYVETGGSVFKRSVVELKGRLCFFKRYGFCNVQVIGMCLAFPFLFLHEEEQGQFHGLLDDLKLVFLDFDLAGSVEGSVDSWYEVCRKIRVFYDLNDDGKYNIGELIGRNKSVILEHGEEELIRKVEYFCKFGVKKEEVALLILQGSELLNINLETPVINVLKLLKHVGLSSEDLEDVRRNYGHVLGTIKMSNLPSVMRALGLHEWFFNKLKDGDHQLLMSYITTYPNEDQDKDYLRGLETIRVSRTPIHNMNKLNFLHALGFGENGFTMSILNDLHGNVSELQERFDCLMNSGIEFSKVCKMITIRPRILSQNPEILVQKINFLCQEMGNNIEILVAFPAFLCHDLESRIKPRYRFHMWVKERGLTKKNYSIASMIATSNKNFVARISRIHPAAPKHWFEQFYPSKLASE 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g0028 554 PANTHER TRANSCRIPTION TERMINATION FACTOR MTEF18, MITOCHONDRIAL 18 547 - -
Lal7g0028 554 Pfam mTERF 424 527 IPR003690 GO:0003690|GO:0006355
Lal7g0028 554 Pfam mTERF 244 330 IPR003690 GO:0003690|GO:0006355
Lal7g0028 554 Gene3D Transcription termination factor 3, mitochondrial 385 546 IPR038538 -
Lal7g0028 554 Gene3D Transcription termination factor 3, mitochondrial 221 353 IPR038538 -
Lal7g0028 554 Gene3D Transcription termination factor 3, mitochondrial 77 209 IPR038538 -
Lal7g0028 554 PANTHER CGI-12 PROTEIN-RELATED 18 547 IPR003690 GO:0003690|GO:0006355
Lal7g0028 554 SMART mt_12 444 475 IPR003690 GO:0003690|GO:0006355
Lal7g0028 554 SMART mt_12 247 278 IPR003690 GO:0003690|GO:0006355
Lal7g0028 554 SMART mt_12 476 510 IPR003690 GO:0003690|GO:0006355
Lal7g0028 554 SMART mt_12 283 314 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g0028 Lal-Chr7 220387 222051 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lal7g0028 mTERF 3.6e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g0028 - - gmx:100812245 681.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g0028 7 220387 222051 Lal7g0028 7 220387 222051 ECH