Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lal7g0016 | ATGTTTGGAAGTGGACCAAGGAAGAGTGATAGCACCAAATATTATGAAGTTCTCGGTGTTTCAAAAAGTGCTAATGAAGATGAAATCAAGAAGGCTTATAGAAAGGCAGCAATGAAGAACCATCCTGATAAGGGTGGAGATCCTGAAAAGTTCAAGGAATTAGGTCAAGCTTATGAAGTGTTAAGTGATCCTGAAAAGAGAGAAGTTTATGACCAATATGGTGAAGACGCCCTTAAAGAAGGAATGGGGGGAGGAGGAGGAGGCCATAATCCCTTTGATATATTTGAATCATTTTTTGGAGCAAGCTTTGGTGGCGGTGGTAGTTCACGAGGTAGAAGACAGATGCAGGGTGAAGATGTGGTTCAATCTTTGAAGGTTTCCTTGGAGGATGTTTACAACGGCACAACAAAGAAACTATCCCTATCTAGAAATGTGTTATGCTCAAAATGTAAAGGGAAAGGTTCCAAAAGTGGAAATACTGGTAAGTGTTTTGGATGCCAAGGTACAGGTATGAAGATTACGACAAGGCAGATTGGACTTGGCATGATTCAACAAATGCAACATGTCTGTTCTGACTGCAGAGGATCGGGTGAGGTCATTAGCGATAGAGATAGATGCCCCCCGTGCAAGGGTAAGAAGGTTACCCAGGAAAAGAAGGTGCTGGAGGTGCATGTTGAGAAGGGGATGCAGCATGGTCAGAAGATTACATTTGAAGGACAAGCTGATGAAGCTCCTGACACCATCACTGGAGACATTGTTTTTGTCTTACAAGTAAAGGACCATCCGAGGTTCAAGAGGGACGGTGATGACCTACATATTGATCACAATCTTAGCTTGACTGAGGCGCTTTGTGGCTTCCAATTTGCTATTACCCATCTTGATGGGAGGCAACTTCTGGTCAAGTCAAACCCTGGGGAAGTCATCAAACCAGGTCAACACAAAGCAATAAATGATGAGGGAATGCCACACCATAATAGGCCCTTCATGAAGGGTAGTCTTTACATCAAGTTTAATGTTGATTTCCCAGAATCCAGGTTCCTTTCTCCTGACAAATGCCGGTTATTAGAAACGATACTACCACACAAGACCAAGAAGCAATTGACATCGATGGAGCTGGATGATTGTGAGGAGACTACTTTGCGTGATGTCAACATGAAGGAGGAAGATATGAGACGAAAGAAGCAACAGCGAGGTCATCCATCATCTAGAATGCATGGGCATGATTATGATGACGACGATGATGATGAGCCATCTGGGCCGCAAGTGCAATGTGCTCAACAGTAG | 1284 | 0.4361 | MFGSGPRKSDSTKYYEVLGVSKSANEDEIKKAYRKAAMKNHPDKGGDPEKFKELGQAYEVLSDPEKREVYDQYGEDALKEGMGGGGGGHNPFDIFESFFGASFGGGGSSRGRRQMQGEDVVQSLKVSLEDVYNGTTKKLSLSRNVLCSKCKGKGSKSGNTGKCFGCQGTGMKITTRQIGLGMIQQMQHVCSDCRGSGEVISDRDRCPPCKGKKVTQEKKVLEVHVEKGMQHGQKITFEGQADEAPDTITGDIVFVLQVKDHPRFKRDGDDLHIDHNLSLTEALCGFQFAITHLDGRQLLVKSNPGEVIKPGQHKAINDEGMPHHNRPFMKGSLYIKFNVDFPESRFLSPDKCRLLETILPHKTKKQLTSMELDDCEETTLRDVNMKEEDMRRKKQQRGHPSSRMHGHDYDDDDDDEPSGPQVQCAQQ | 427 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lal7g0016 | 427 | Pfam | DnaJ domain | 13 | 71 | IPR001623 | - | |
Lal7g0016 | 427 | SUPERFAMILY | HSP40/DnaJ peptide-binding domain | 118 | 262 | IPR008971 | GO:0006457|GO:0051082 | |
Lal7g0016 | 427 | SUPERFAMILY | HSP40/DnaJ peptide-binding domain | 263 | 344 | IPR008971 | GO:0006457|GO:0051082 | |
Lal7g0016 | 427 | CDD | DnaJ | 14 | 63 | IPR001623 | - | |
Lal7g0016 | 427 | SMART | dnaj_3 | 12 | 66 | IPR001623 | - | |
Lal7g0016 | 427 | Gene3D | DnaJ domain | 10 | 109 | IPR036869 | - | |
Lal7g0016 | 427 | Gene3D | - | 147 | 213 | - | - | |
Lal7g0016 | 427 | SUPERFAMILY | DnaJ/Hsp40 cysteine-rich domain | 144 | 216 | IPR036410 | - | |
Lal7g0016 | 427 | MobiDBLite | consensus disorder prediction | 383 | 410 | - | - | |
Lal7g0016 | 427 | ProSitePatterns | Nt-dnaJ domain signature. | 51 | 70 | IPR018253 | - | |
Lal7g0016 | 427 | Pfam | DnaJ C terminal domain | 123 | 342 | IPR002939 | - | |
Lal7g0016 | 427 | MobiDBLite | consensus disorder prediction | 383 | 427 | - | - | |
Lal7g0016 | 427 | CDD | DnaJ_C | 118 | 344 | - | - | |
Lal7g0016 | 427 | PANTHER | DNAJ-LIKE-2, ISOFORM A-RELATED | 8 | 427 | IPR044713 | GO:0006457|GO:0030544 | |
Lal7g0016 | 427 | CDD | DnaJ_zf | 147 | 213 | IPR001305 | GO:0031072|GO:0051082 | |
Lal7g0016 | 427 | Gene3D | - | 261 | 343 | - | - | |
Lal7g0016 | 427 | Gene3D | - | 110 | 259 | - | - | |
Lal7g0016 | 427 | PANTHER | CHAPERONE PROTEIN DNAJ A6 | 8 | 427 | - | - | |
Lal7g0016 | 427 | ProSiteProfiles | Zinc finger CR-type profile. | 134 | 218 | IPR001305 | GO:0031072|GO:0051082 | |
Lal7g0016 | 427 | Hamap | Chaperone protein DnaJ [dnaJ]. | 10 | 383 | IPR012724 | GO:0005524|GO:0006457|GO:0009408|GO:0051082 | |
Lal7g0016 | 427 | ProSiteProfiles | dnaJ domain profile. | 13 | 74 | IPR001623 | - | |
Lal7g0016 | 427 | PRINTS | DnaJ domain signature | 15 | 33 | IPR001623 | - | |
Lal7g0016 | 427 | PRINTS | DnaJ domain signature | 46 | 66 | IPR001623 | - | |
Lal7g0016 | 427 | PRINTS | DnaJ domain signature | 66 | 85 | IPR001623 | - | |
Lal7g0016 | 427 | SUPERFAMILY | Chaperone J-domain | 9 | 109 | IPR036869 | - | |
Lal7g0016 | 427 | Pfam | DnaJ central domain | 147 | 213 | IPR001305 | GO:0031072|GO:0051082 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lal7g0016 | Lal-Chr7 | 158342 | 162536 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lal7g0016 | 14 | 73 | C2H2 Transcription Factor Family | AT1G74250 | 47.826 | 3.71e-11 | 63.2 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lal7g0016 | K09503 | - | gmx:100800590 | 663.299 |