Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g0016 ATGTTTGGAAGTGGACCAAGGAAGAGTGATAGCACCAAATATTATGAAGTTCTCGGTGTTTCAAAAAGTGCTAATGAAGATGAAATCAAGAAGGCTTATAGAAAGGCAGCAATGAAGAACCATCCTGATAAGGGTGGAGATCCTGAAAAGTTCAAGGAATTAGGTCAAGCTTATGAAGTGTTAAGTGATCCTGAAAAGAGAGAAGTTTATGACCAATATGGTGAAGACGCCCTTAAAGAAGGAATGGGGGGAGGAGGAGGAGGCCATAATCCCTTTGATATATTTGAATCATTTTTTGGAGCAAGCTTTGGTGGCGGTGGTAGTTCACGAGGTAGAAGACAGATGCAGGGTGAAGATGTGGTTCAATCTTTGAAGGTTTCCTTGGAGGATGTTTACAACGGCACAACAAAGAAACTATCCCTATCTAGAAATGTGTTATGCTCAAAATGTAAAGGGAAAGGTTCCAAAAGTGGAAATACTGGTAAGTGTTTTGGATGCCAAGGTACAGGTATGAAGATTACGACAAGGCAGATTGGACTTGGCATGATTCAACAAATGCAACATGTCTGTTCTGACTGCAGAGGATCGGGTGAGGTCATTAGCGATAGAGATAGATGCCCCCCGTGCAAGGGTAAGAAGGTTACCCAGGAAAAGAAGGTGCTGGAGGTGCATGTTGAGAAGGGGATGCAGCATGGTCAGAAGATTACATTTGAAGGACAAGCTGATGAAGCTCCTGACACCATCACTGGAGACATTGTTTTTGTCTTACAAGTAAAGGACCATCCGAGGTTCAAGAGGGACGGTGATGACCTACATATTGATCACAATCTTAGCTTGACTGAGGCGCTTTGTGGCTTCCAATTTGCTATTACCCATCTTGATGGGAGGCAACTTCTGGTCAAGTCAAACCCTGGGGAAGTCATCAAACCAGGTCAACACAAAGCAATAAATGATGAGGGAATGCCACACCATAATAGGCCCTTCATGAAGGGTAGTCTTTACATCAAGTTTAATGTTGATTTCCCAGAATCCAGGTTCCTTTCTCCTGACAAATGCCGGTTATTAGAAACGATACTACCACACAAGACCAAGAAGCAATTGACATCGATGGAGCTGGATGATTGTGAGGAGACTACTTTGCGTGATGTCAACATGAAGGAGGAAGATATGAGACGAAAGAAGCAACAGCGAGGTCATCCATCATCTAGAATGCATGGGCATGATTATGATGACGACGATGATGATGAGCCATCTGGGCCGCAAGTGCAATGTGCTCAACAGTAG 1284 0.4361 MFGSGPRKSDSTKYYEVLGVSKSANEDEIKKAYRKAAMKNHPDKGGDPEKFKELGQAYEVLSDPEKREVYDQYGEDALKEGMGGGGGGHNPFDIFESFFGASFGGGGSSRGRRQMQGEDVVQSLKVSLEDVYNGTTKKLSLSRNVLCSKCKGKGSKSGNTGKCFGCQGTGMKITTRQIGLGMIQQMQHVCSDCRGSGEVISDRDRCPPCKGKKVTQEKKVLEVHVEKGMQHGQKITFEGQADEAPDTITGDIVFVLQVKDHPRFKRDGDDLHIDHNLSLTEALCGFQFAITHLDGRQLLVKSNPGEVIKPGQHKAINDEGMPHHNRPFMKGSLYIKFNVDFPESRFLSPDKCRLLETILPHKTKKQLTSMELDDCEETTLRDVNMKEEDMRRKKQQRGHPSSRMHGHDYDDDDDDEPSGPQVQCAQQ 427
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lal7g0016 427 Pfam DnaJ domain 13 71 IPR001623 -
Lal7g0016 427 SUPERFAMILY HSP40/DnaJ peptide-binding domain 118 262 IPR008971 GO:0006457|GO:0051082
Lal7g0016 427 SUPERFAMILY HSP40/DnaJ peptide-binding domain 263 344 IPR008971 GO:0006457|GO:0051082
Lal7g0016 427 CDD DnaJ 14 63 IPR001623 -
Lal7g0016 427 SMART dnaj_3 12 66 IPR001623 -
Lal7g0016 427 Gene3D DnaJ domain 10 109 IPR036869 -
Lal7g0016 427 Gene3D - 147 213 - -
Lal7g0016 427 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 144 216 IPR036410 -
Lal7g0016 427 MobiDBLite consensus disorder prediction 383 410 - -
Lal7g0016 427 ProSitePatterns Nt-dnaJ domain signature. 51 70 IPR018253 -
Lal7g0016 427 Pfam DnaJ C terminal domain 123 342 IPR002939 -
Lal7g0016 427 MobiDBLite consensus disorder prediction 383 427 - -
Lal7g0016 427 CDD DnaJ_C 118 344 - -
Lal7g0016 427 PANTHER DNAJ-LIKE-2, ISOFORM A-RELATED 8 427 IPR044713 GO:0006457|GO:0030544
Lal7g0016 427 CDD DnaJ_zf 147 213 IPR001305 GO:0031072|GO:0051082
Lal7g0016 427 Gene3D - 261 343 - -
Lal7g0016 427 Gene3D - 110 259 - -
Lal7g0016 427 PANTHER CHAPERONE PROTEIN DNAJ A6 8 427 - -
Lal7g0016 427 ProSiteProfiles Zinc finger CR-type profile. 134 218 IPR001305 GO:0031072|GO:0051082
Lal7g0016 427 Hamap Chaperone protein DnaJ [dnaJ]. 10 383 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Lal7g0016 427 ProSiteProfiles dnaJ domain profile. 13 74 IPR001623 -
Lal7g0016 427 PRINTS DnaJ domain signature 15 33 IPR001623 -
Lal7g0016 427 PRINTS DnaJ domain signature 46 66 IPR001623 -
Lal7g0016 427 PRINTS DnaJ domain signature 66 85 IPR001623 -
Lal7g0016 427 SUPERFAMILY Chaperone J-domain 9 109 IPR036869 -
Lal7g0016 427 Pfam DnaJ central domain 147 213 IPR001305 GO:0031072|GO:0051082
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lal7g0016 Lal-Chr7 158342 162536 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g0016 14 73 C2H2 Transcription Factor Family AT1G74250 47.826 3.71e-11 63.2
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g0016 K09503 - gmx:100800590 663.299
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g0016 7 158342 162536 Lal7g0016 7 158342 162536 ECH