Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g0004 ATGGAGGGATTGGAAGGCATGATAGAGAGGCTTTTAGAAGCAAGGAAGAACAAAGGCAATCGTATTCAACTTGTAGAGTCTGAAATTCGCGATCTTTGTGTCAACGCAAAAGAAATCTTCCTCTCCCAACCTAACCTACTCGAATTGGAAGCTCCCATTAATGTTTGTGGTGATATACATGGGCAATACCCAGACCTATTGCGAGTGTTCGAGTATGGTGGTTTTCCTCCAGATTCGAATTACTTATTCCTTGGTGACTATGTTGATAGAGGAAAACAAAGTATAGAAACAATATGTCTCTTACTTGCTTTCAAGATCAAATACCCAGAAAACTTCTTTCTTCTAAGAGGCAATCATGAATGTGCATCTATCAACAGAATTTATGGTTTTTATGATGAGTGTAAGAGAAGATTCAGTGTTAGACTATGGAAGATATTTACAGATTGTTTCAATTGTTTACCAGTATCAGCAGTGATTGATGACAAGATACTATGCATGCATGGAGGGCTTTCTCCTGAGATGGAAAGTTTGAATCAGATCAAAGCAATTGAAAGGCCAATAGATGTTCCTGATCAGGGTCTCTTATGTGACCTCCTTTGGTCTGATCCTGACACAGAAACAAGAGGATGGGGTGAGAATGATCGAGGTGTTTCATACACTTTTGGACCTGATAAGGTTTCTGATTTCTTGAAGAAACACGATCTCGATCTCATATGCAGGGCTCACCAGGTTGTGGAAGATGGATACCAATTCTTTGCAGATAGGCAACTAGTTACTATATTTTCAGCGCCAAACTATTGTGGAGAGTTCAATAACGCAGGTGCTCTAATGTGCGTCGATCAAACTTTACTATGTTCTTTTCAGATTCTCAAACCCTTTAGACGAAAAAACACACACTTGGAATAG 906 0.394 MEGLEGMIERLLEARKNKGNRIQLVESEIRDLCVNAKEIFLSQPNLLELEAPINVCGDIHGQYPDLLRVFEYGGFPPDSNYLFLGDYVDRGKQSIETICLLLAFKIKYPENFFLLRGNHECASINRIYGFYDECKRRFSVRLWKIFTDCFNCLPVSAVIDDKILCMHGGLSPEMESLNQIKAIERPIDVPDQGLLCDLLWSDPDTETRGWGENDRGVSYTFGPDKVSDFLKKHDLDLICRAHQVVEDGYQFFADRQLVTIFSAPNYCGEFNNAGALMCVDQTLLCSFQILKPFRRKNTHLE 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g0004 301 CDD MPP_PP1_PPKL 4 292 - -
Lal7g0004 301 Pfam Serine-threonine protein phosphatase N-terminal domain 5 50 IPR031675 -
Lal7g0004 301 SMART pp2a_7 24 294 IPR006186 GO:0016787
Lal7g0004 301 ProSitePatterns Serine/threonine specific protein phosphatases signature. 115 120 IPR006186 GO:0016787
Lal7g0004 301 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 1 299 - -
Lal7g0004 301 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 1 299 - -
Lal7g0004 301 SUPERFAMILY Metallo-dependent phosphatases 20 295 IPR029052 -
Lal7g0004 301 Coils Coil 8 28 - -
Lal7g0004 301 PRINTS Serine/threonine phosphatase family signature 52 79 IPR006186 GO:0016787
Lal7g0004 301 PRINTS Serine/threonine phosphatase family signature 81 108 IPR006186 GO:0016787
Lal7g0004 301 PRINTS Serine/threonine phosphatase family signature 114 138 IPR006186 GO:0016787
Lal7g0004 301 PRINTS Serine/threonine phosphatase family signature 148 174 IPR006186 GO:0016787
Lal7g0004 301 PRINTS Serine/threonine phosphatase family signature 177 204 IPR006186 GO:0016787
Lal7g0004 301 PRINTS Serine/threonine phosphatase family signature 234 254 IPR006186 GO:0016787
Lal7g0004 301 PRINTS Serine/threonine phosphatase family signature 256 272 IPR006186 GO:0016787
Lal7g0004 301 Pfam Calcineurin-like phosphoesterase 52 244 IPR004843 GO:0016787
Lal7g0004 301 Gene3D - 2 300 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g0004 Lal-Chr7 38490 40580 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g0004 31 240 Calmodulin-binding Proteins AT5G63870 31.076 9.42e-31 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g0004 K06269 - gmx:100804212 576.63