Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g0002 ATGATGGGATTGATGAGAGTGAAATGGCAGAATTGTGTAAGAAAGATAAGGTTTCTTCAAACTCGACCTCAAAGCAGTAGCAACCAAATTTTAATTTCTCCATCATCTCTTACTTCTCTCGACCTTCCTAATGATGACACATGGACTTGTAATTCTTCTTCTCAGACCACTCTTATTCCAACAGTTAACACTGCTAAGGTGATTGATGGAAAGTTAATTTCAATGGAAATCAAATCAAAAATAGCTTCTGAGGTAACACGAATGAAGAAATGCCTTGGAATAGTTCCTGGATTAGCTGTCATTTTGGTGGGTCAGAGAAAGGATTCTCAAATTTATGTCCGCAACAAAATACTCGCCTGCGACCAAGTTGGATTAAACTCTTTCGTTACTGAACTACCCACTGATTCTACACAAGCAGATGTTTGTAAAGCTGTCATGAAATTTAACAAGGATCCCTCAATTCATGGTATTCTTGTGCAACTTCCTCTCCCACAACATCTAGACGAGGAAGAAGTCTTGGGTTCTGTATGTATAGAAAAGGATGTGGATGGTTTTAATCCTCTTAATATAGGGAATCTAGCAATCAGAGGAGGGGAGCCACTATTTACTCCCTGTACTCCAAAAGGCTGCATTGAGTTATTGATCAGATCTGGAGTGAAGATTATGGGGAAGAACGCGGTAGTGATTGGAAGAAGTAATATTGTTGGTTTGCCAACATCCTTGTTATTGCAGAGACACCATGCTACAGTCACTATTATACATGCATTTACAGAAAATCCTCAAAAGATCACTTGTGATGCTGATATTCTAGTTTCAGCTGCTGGAGTGCCTAATTTGGTCCGTGGCAAGTGGATAAAGCCTGGTGCAACTGTGATCGATGTTGGAACAAGTCCTGTGGAGGATCTTAGCTGCGAGGATGGTTACCGTCTCATGGGCGATGTATGCTATGAAGAAGCAGTAACAGTGGCAGCTGCTATCACCCCTGTGCCTGGAGGGGTTGGACCTATGACTGTTGCAATGCTGCTACTTAACACTCTAGATTCTGCCAAACGTGTGCTTAATTTTATTTGA 1071 0.4118 MMGLMRVKWQNCVRKIRFLQTRPQSSSNQILISPSSLTSLDLPNDDTWTCNSSSQTTLIPTVNTAKVIDGKLISMEIKSKIASEVTRMKKCLGIVPGLAVILVGQRKDSQIYVRNKILACDQVGLNSFVTELPTDSTQADVCKAVMKFNKDPSIHGILVQLPLPQHLDEEEVLGSVCIEKDVDGFNPLNIGNLAIRGGEPLFTPCTPKGCIELLIRSGVKIMGKNAVVIGRSNIVGLPTSLLLQRHHATVTIIHAFTENPQKITCDADILVSAAGVPNLVRGKWIKPGATVIDVGTSPVEDLSCEDGYRLMGDVCYEEAVTVAAAITPVPGGVGPMTVAMLLLNTLDSAKRVLNFI 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g0002 356 PANTHER C-1-TETRAHYDROFOLATE SYNTHASE, CYTOPLASMIC-RELATED 54 355 - -
Lal7g0002 356 PANTHER BIFUNCTIONAL PROTEIN FOLD 1, MITOCHONDRIAL 54 355 - -
Lal7g0002 356 Hamap Bifunctional protein FolD [folD]. 65 353 IPR000672 GO:0004488
Lal7g0002 356 Pfam Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 186 351 IPR020631 GO:0004488
Lal7g0002 356 Pfam Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 68 183 IPR020630 GO:0004488
Lal7g0002 356 CDD NAD_bind_m-THF_DH_Cyclohyd 178 350 IPR020631 GO:0004488
Lal7g0002 356 ProSitePatterns Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 330 338 IPR020867 GO:0003824
Lal7g0002 356 Gene3D - 68 329 - -
Lal7g0002 356 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 96 118 IPR000672 GO:0004488
Lal7g0002 356 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 137 164 IPR000672 GO:0004488
Lal7g0002 356 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 172 193 IPR000672 GO:0004488
Lal7g0002 356 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 219 239 IPR000672 GO:0004488
Lal7g0002 356 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 268 297 IPR000672 GO:0004488
Lal7g0002 356 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 309 325 IPR000672 GO:0004488
Lal7g0002 356 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 326 344 IPR000672 GO:0004488
Lal7g0002 356 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 65 184 IPR046346 -
Lal7g0002 356 Gene3D Leucine Dehydrogenase, chain A, domain 1 70 347 - -
Lal7g0002 356 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 185 350 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g0002 Lal-Chr7 16322 19688 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g0002 - - gmx:100791604 500.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0904 6 6265091 6268821 Lal7g0002 7 16322 19688 PCT