Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g1732 ATGGCAGTAGATGAAGTTTGTACAAAATCAAAATGGAAGTATCATGTGTTTTTGAGTTTTAGGGGAGAAGACACTCGCTTCAATTTCACTGATCACTTATATAAAGCCTTAGTGAGGAAAGGTATCATAACATTCAGAGATGATGAAGAACTTGAAAGGGGTGAAAGTATCTCACAAAATCTCCTTCATGCAATTGAGGAATCTCTTATTGCAATTGTTATAATCTCCCCAAATTATGCTTCTTCAACTTGGTGTTTGGATGAGTTACAAAAAATTGTTGATTGCAATCAAAGTTTGGGACTACAAGTATTCCCAATTTTCTATGGTGTAGATTCATCTCATGTACGACATCAAAGGGGAAGTTTTGAACAAGCTTTCAAGGATCATGAACAGAGATTTGAAGGAGACAAAGAGAAGGTGCAAAAATGGAGAGATGTACTCAAAGATGTTGCTGAGTTATCTGGTTGGGACTCTAAAAATAAGCATGAGTCAAAACTCATTGAAGAAATAGTTGAAGAAATATGGACAAAGTTGGAACCCAAGTTGGCAATGAATACGGATGGATTGATTTCAATAGAAACAAAAGTAAATGATTTGATTTCACATTTAAGATTGAGATTGCAAGATACTCACCTTATAGGAATATGGGGTATGGGTGGTATTGGAAAAACAACCCTAGCTGATGTTGTTTTCAACAAAATCAAAAGCAAATTTGATTTTAGTTGCTTTCTTGCCAATGTTAGAGAGGCTTCTAATGAAGGGGATCAAGGTCTGATTCAACTACAAGATAAACTTCTTTCAGAGTTGAAACCAAAGAGCATGAAAATTGATACTTTAAGACAAGGAAAAGACATGATAAAAAACCTTGTACACAACAAAAAAGTTCTTCTGGTACTTGATGATGTGAATGCTGAAATTCAACTTGAGTATCTGGCTGGAAACAAAAACTGGTTTGGTGAAGGGAGTAGAATAATAGTGACAACTAGGGATAAACACTTGCTGACTTCAACCATTAATGGACTTCATCCATTTATATATGAGACGAGAGTCTTAAATTATGAAGAGTCTCTTCTTCTCTTTTGTGAAAAAGCATTTAATGGAAATCAACCATTGAGTGATTATTTGGAGTTGTCTAAAAAAGTAGTTGAATACACTGGAGGGCTTCCTTTGGCAATTAAAGTGTATGGTTCATTACTTAATGGAAGAAGTATTCAAGAATGGGAAGACATTTTGATTAACATTGGTCGAGTTCCACCTAATGATATCATCAAGAAACTTAAAATAAGTTATGATATGTTGGAAGATGAGTACAAGACTATATTTTTGAATATTGCATGTTTCTTCAAGGGATGGGAAAAAGAATTTGTGACAAAAATATTAGACAAATGTGGCATCCATCCGAGAGTAGGAATAAGCGTTCTTATTGAAAAATCACTCATAACTTGTGATGCAAATCGTATTCTAAGAATGCATGATTTGCTTGAGGAAATGGGTAAAAATATTGTTATCCAAGAATCTCCATTCGATCTTGGTAGACGTCGATGGTTGTGGTCTCTTGAAGATATTGATGAAGTATTGAGAACAAATACAGGAACTGAGAAAGTCCAAGGAATATTTTGGAACCGAAGAATGCCATATGATGCACGTTGGCTACCCGATGCATTCTCTAAAATGTGTAACATTAGATTACTCTTCATAAATTGTGATTTGAATCTTCCCATTGGTCTCAAATGTCTTTCTAGTTCGTTAAAAGTTGTTATTTGGCTTGGATATCCTTTGAAAGCTTTGCCACTTGATGTGCCACTAGATGAACTTGTTCACTTGGAGATTTCCTACAGCAAAATAGAAAAGCTTTGGAATGGAACTCATTCTTTTTGGAAACTAGAATACCTCAACTTGTCAAATTCTAAATACCTAATTGAAACTCCAGATATTTCTCGCGTGCCAAATCTTAAACAGCTTGATCTTTCTGGTTGTACTAAGCTTGTTAAAGTACACTATTCTGTTGGAGTACACAAGAAGCTTGAAAAAATGAGCTTTTATGGATGCATAAACCTTGAAACTTTGCCAAGTAAAATGGAAATGGATTCTTTGAAGTGGCTTATTCTTGATAAATGCTCAAAGCTTAGGAGACTTCCTGATTTTGATGAGAAAATGGAATGTGTCTCAAAAATATATTTAAAGTATTGTACAAATCTTCTTTCCCTTCCAAATACAATTAGCAATTTGAAGACTCTGAAAATTCTCAACATATCTGGATGCTCAAATGTTGATAGGCTTCCAAACAATATAAATGAAAACAAAGCTTTGGAGGAACTTAATGTGAGCTATACATCTATAAGAGAAGTGAATTCATCTGTATTTCATTTGGAAAATCTCAAAAAGCTTCATTTTTTTGGATGTAGTGGGCCAATATTCAAATCTCAAGGCAAACTTTTATCACCTTTGTGGAAGTGTTGGAGAGAAAGGTATCGAAATATTATTACCGAATCCTTAATATTGCATCCTTCCATCTGCAATCTTTCCTCATTAACTTTTTTAGATTTAAGTTACTGTAACCTCAAATCACTCCCTGAAGATATTGGGCACTTACCATCATTGGAGATGTTACTTTTATGTGGGAATGTGAATCTGACCCTACATTTGGTTACCATAGCTAATCTTTCTAAGCTTCGTGTTCTTTTCTTTGATGGTAATATGTATGGATCTCGAACTCTACTTCCCAAACACGTGTGCATATATCCACAAGATGGAAGAGCAGAAGCTAGTGTAGTAAACGGACCAAACCTGTGGAAGTTGTTCAAGTCATATTGCAACGAGGATGAGCATATTGAGGATTGTTCGCCATTTTCTTTGTTTGCAATACCAATCAGGACTATTAATGAGAACAATTCAACTTACTATATTGTTGGGCCAATTTTGTCAAGACATGATTCAAGTATAAACATTCGTAACGATTGTGGTATGGGTGCATGGTTTGGAGTTGCCTTATTTGTTGTTTTAGATCCTGAGATGTCTTTATCTACACCAAATTCCATGTACATTCATTGGTCATTTGAATCTCTCAATGAAGATGCTAGGACTACCTTTTTTACCACATCAACGACTGCAAATAGTAATCACTACGTGATGACAATCATAATGAACGATCATGTTACATACATTCAACGACATCAAAGTGGTTACCATCACAGTGTTGAATCAAACCATTTTGTCTCTTATTGGGATACTGTTGAAAATAGTCAGTTATTAGTTGATGTTGAAGTGGAAGGAAGAAAGGTGAGGAAATGTTGGTGGCATCACTTAGGTAAGGAAGATTTTAGGTTTGAATAG 3333 0.3486 MAVDEVCTKSKWKYHVFLSFRGEDTRFNFTDHLYKALVRKGIITFRDDEELERGESISQNLLHAIEESLIAIVIISPNYASSTWCLDELQKIVDCNQSLGLQVFPIFYGVDSSHVRHQRGSFEQAFKDHEQRFEGDKEKVQKWRDVLKDVAELSGWDSKNKHESKLIEEIVEEIWTKLEPKLAMNTDGLISIETKVNDLISHLRLRLQDTHLIGIWGMGGIGKTTLADVVFNKIKSKFDFSCFLANVREASNEGDQGLIQLQDKLLSELKPKSMKIDTLRQGKDMIKNLVHNKKVLLVLDDVNAEIQLEYLAGNKNWFGEGSRIIVTTRDKHLLTSTINGLHPFIYETRVLNYEESLLLFCEKAFNGNQPLSDYLELSKKVVEYTGGLPLAIKVYGSLLNGRSIQEWEDILINIGRVPPNDIIKKLKISYDMLEDEYKTIFLNIACFFKGWEKEFVTKILDKCGIHPRVGISVLIEKSLITCDANRILRMHDLLEEMGKNIVIQESPFDLGRRRWLWSLEDIDEVLRTNTGTEKVQGIFWNRRMPYDARWLPDAFSKMCNIRLLFINCDLNLPIGLKCLSSSLKVVIWLGYPLKALPLDVPLDELVHLEISYSKIEKLWNGTHSFWKLEYLNLSNSKYLIETPDISRVPNLKQLDLSGCTKLVKVHYSVGVHKKLEKMSFYGCINLETLPSKMEMDSLKWLILDKCSKLRRLPDFDEKMECVSKIYLKYCTNLLSLPNTISNLKTLKILNISGCSNVDRLPNNINENKALEELNVSYTSIREVNSSVFHLENLKKLHFFGCSGPIFKSQGKLLSPLWKCWRERYRNIITESLILHPSICNLSSLTFLDLSYCNLKSLPEDIGHLPSLEMLLLCGNVNLTLHLVTIANLSKLRVLFFDGNMYGSRTLLPKHVCIYPQDGRAEASVVNGPNLWKLFKSYCNEDEHIEDCSPFSLFAIPIRTINENNSTYYIVGPILSRHDSSINIRNDCGMGAWFGVALFVVLDPEMSLSTPNSMYIHWSFESLNEDARTTFFTTSTTANSNHYVMTIIMNDHVTYIQRHQSGYHHSVESNHFVSYWDTVENSQLLVDVEVEGRKVRKCWWHHLGKEDFRFE 1110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g1732 1110 PRINTS Disease resistance protein signature 212 227 - -
Lal6g1732 1110 PRINTS Disease resistance protein signature 289 303 - -
Lal6g1732 1110 PRINTS Disease resistance protein signature 385 399 - -
Lal6g1732 1110 PRINTS Disease resistance protein signature 646 662 - -
Lal6g1732 1110 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 182 443 IPR027417 -
Lal6g1732 1110 SUPERFAMILY L domain-like 490 951 - -
Lal6g1732 1110 SMART till_3 13 153 IPR000157 GO:0007165
Lal6g1732 1110 Gene3D - 176 339 IPR027417 -
Lal6g1732 1110 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 9 765 - -
Lal6g1732 1110 Gene3D - 7 175 IPR035897 -
Lal6g1732 1110 ProSiteProfiles TIR domain profile. 12 178 IPR000157 GO:0007165
Lal6g1732 1110 Pfam TIR domain 13 184 IPR000157 GO:0007165
Lal6g1732 1110 Gene3D Ribonuclease Inhibitor 546 720 IPR032675 -
Lal6g1732 1110 Gene3D Ribonuclease Inhibitor 721 812 IPR032675 -
Lal6g1732 1110 ProSiteProfiles Leucine-rich repeat profile. 843 864 IPR001611 GO:0005515
Lal6g1732 1110 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 9 765 IPR044974 GO:0006952
Lal6g1732 1110 Pfam NB-ARC domain 193 417 IPR002182 GO:0043531
Lal6g1732 1110 SUPERFAMILY Toll/Interleukin receptor TIR domain 10 156 IPR035897 -
Lal6g1732 1110 Gene3D Ribonuclease Inhibitor 824 905 IPR032675 -
Lal6g1732 1110 Gene3D - 350 434 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g1732 Lal-Chr6 20006857 20026081 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g1732 10 798 WRKY Transcription Factor Family AT4G12020 29.844 1.84e-92 324