Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g1725 ATGGAACTCTACGGTAGTTGGAGCTGTGGAACCATAATAAACCTCACGTATCCATTCTGGGGTGGAAACAGACCAGACTACTGCGGCGAACCTTACTTAAGTGTGAGTTGCGAAAGCGATGTCCCGAAGTTTAGTGTCAATTCAGTGACATATAGGATTCTTGGTTGGGACATGAAAACACAGAATCTGACAGTTGCTAGGGATGATTTATGGGATAACCTTTGTTTGACTAGTTATCATACAACAACCTTTGATGGTACTATATTTCATTTTGATAATAACCTTACAAACGTGACATTGTTATATGATTGCCGTTCAAATAATCCTCCAACGGGTAATAGTAGAAGCTGTAGTGATGGTAAAAGTGTGTATTATGCTTTGGGGAGTTCTGGTTTTGAGTATTGCACAAGTGTTTTTGTTCCAATTTTCGAGTCCCAGGTTGGAACTGTGAGTGGGAATATAAATCTAATTTCACAAGCATTGCAAGTTGGTTTTGGGTTGGATTGGGAAAATTATGATGAGTGCAACACATGCATGGATTCTGGTGGGGTGTGCATAGTTTATGATGGGAAATTCTCTTGTTGCAAGGATGAATCTTCATGTCCAGGCTCAGGTGATAAAAAGAGCAAAGTAGGTGTTGCAATAGGTGCTGCTGCAGGAGCCGTCGCCCTTGTTGCCATTCTTGGAATTGTGTGGTTTATGGTGAAACGAAAGAAAAAAGTTGCTGCTTCTAAGCAATCAATGAGTGAGGACCTCTTCACACCTCCTTCAAGCAATGGTGCTTTTACCTCGACAACTAATATGTCACAAAGTGTCCCTTCTTACACATCTTCCAAGACTGACTCTGTGCCGCCGATGAAGAGTTTCTACTTTGGTGTCCAGGTGTTTACCATTGCTGAATTAGAGGAAGCTACCGACAATTTTAACCCTTCTAGAGAGCTCGGCGATGGAGGTTTCGGTACTGTTTACAAAGGTGAACTCAAAGATGGACGCGTGGTTGCAGTGAAACGCCATTATGAGAGCAATTTTAAAAGAGTTCGGCAATTCATGAATGAAGTTGAGATTCTGGCCCGGTTAAGGCATAAGAACCTGGTAACACTTTTCGGATGCACCTCGAGACATAGCCGAGAACTTCTCCTTGTTTATGAATTCATATCAAATGGAACAGTGGATGACCATATTCATGGAAATAGAGCGAATTCTAATTTCGTTTCTTGGCCTGTAAGACTAAACATTGCTATTGAAACAGCTGAGGCACTAGCCTACCTCCATGCATCAGATGTCATACACCGCGATGTTAAATCGAACAATATTCTCCTGGATGACAATTTTTGTGTGAAGGTTGCTGATTTTGGCCTGTCAAGGTTGTTCCCGAATGACGCTACTCATGTGTCAACTGCTCCTCAAGGAACACCTGGTTATGTTGACCCAGAGTATTATCAGTGCTACCAACTCACTGATAAGAGTGATGTCTATAGCTTCGGAGTGGTCTTAATTGAGCTTATATCATCGCTACAAGCCGTGGATGTTAACAGGCATCGCAATGATGTGAATTTAGCCAACATGGCTGTCAATAAAATTCAAAACCAAGAAATTCATGACTTGGTTGATCCAAATCTCGGATATGACAAAGACAACGGTATAAGGAGGATGACAACAGAAGTCGCGGAATTGGCATTCAGGTGTTTGCAGCAGCAGAGAGACATGAGACCCTCAATGGATGAGGTGCTGGAGGTCTTGAGAGGAATCAAAAGTGATGAGCATGATGCAACAAGAGAAGCTGATGTAGTGAATGTTAGGACAGAAGAAGTTATGCTTTTGAACAATGTCCATTACCCACTTTCTTCAACAGATTCATTTGATGATAAACAGGCTGGCCTGCGTGACCGAGCCAGCCTGACCCATGTGACTTTGGCCTTTGCCTGCTTGACCGATAGTTCAAGAGATGCTAAGAAGAACAACTTAAGAACATGTGCAATTCCAGAGAGTGATGTTCTTAATAAGCATTCAGAACTACATTGGAAGGTAGATTTTGGTGATATATATGATGCATATATATACACATGCAAATATTATGTACAAGATATTGATTACAACAAATATACAATTCTTGTTAGTGATGTTGGTGTTATTGATGATGAGGATAGTAATTGTTCATTCATTCCTAGTTATTTCTTATATGAAGGTAGTTTTGGTAACAACTTCATTGGTCCTGGAACCAACCCTTTCAAATTGGATGCTACTATTACTATATCATACTTCAATTGTTCCAATATGGTCATTGATGATCATAGATATGTGGATGTGGGTACCACTTGTTCTGACTCAGGAGGACACATCTATGCTGTTGTCGATAATTCATCAAATCATGATTTTAGTGTGATGGACATAAAGATTGGGTGCCAACTGAAGGTATCTACTTTTGCAAATTGGGGAAGAGTCGAATATGACAAGAATAAGAACATTTCCTATGATGAGATTCACAACATGTTGGTATATGGATTTAGGTTATCATGGCTATATGTTATTTGTGAAGATCAATGTGGAAAAGGTTTTGATTGCCATGTTGTTGATGAATCCACCGGAGAAGTTCAATGTGACCACGACCAACTATGTCCTTTTCTTTATGATGGCCCAAACAAAGTTATCTACGATTGTGACAAATTTCTGACAGGTTATGCTGTTGGATTTTATGCTGGTTTAAAACATGTGAAAAGAGGTGATGAATATGATGGAATTGGAGCAAATATAGGAGAAGCCATGGGAAGGTATATCCCTCCATACATTATAGTTAGATATCTATTGGGCCTTGTAGCTTTCATTCTACTATTGATCTACAAATGGAGAAGAAGACACAAATCAATGTATGAAAATATTGAAGATTTTTTGCAAAGGGATACCTTCATGCCTATAAGATACTCATACAAAGAAATAAAGAAAATGACCTATGGTTTTAGAGAAAAACTAGGCCAAGGAGGGTTTGGTTTAGTGTATAAGGGAAAACTAAGAAGTGGGTCATTTGTAGCCATAAAAATGTTGACCAAATCAAAAGATAATGGGCAAGATTTCATTAGTGAAGTTGGAACCATAGGAAGAATACACCATGCCAATGTGGTAAGACTTATTGGGTTTTGTGTTGAAGGTTCAACCAAAGCTCTTGTCTATGAATTCATGCCAAATGGCTCTCTTGATAAATACATTTTCTCAAAACAAGACAATGTCTTATTATCATATGAGAAAATATATGAGATATCTCTTGGAGTGGCTCATGCTATATCTTATCTACATAATGATTGTGATATGCAAATTTTACATTTCGATATCAAGCCTCATAATATACTTCTCGATGAAAACTTCGTCCCTAAGCTTTCGGATTTTGGTCTAGCAAAACTTTACCCTGTAGACAAAAATGTCGTTACTATGACCGGAGCAAGAGGAACACTTGGATACATGGCTCCTGAGTTATTCTACCACAACCTTGGTGGAGTTTCGTATAAGGCTGATGTTTATAGCTTTGGGATGCTTTTGATGGAAATGGCAAGTAGAAGAAGAAATTTCATTTCCAATGTAGAAAGTGATGTACAAAGTTCAAGTCAACTTTACTTTCCTATGTGGATTTATGACCAACTTGATAAAGATAAAGATATAGAATTGGAAAATCTTACAAAGGAGGAAAATGAAATAACAAAGAAGATGATTATAGTGGCACTTTGGTGTATACAGTTAAAACCAAGTGATCGTCCTTCAATGTATAAAGTAGTGGAGATGCTTGAAGAAGAAAGTGAGAGTATTGAAATGCCACCAAAACCTTCTTTGTATCCTCGACAAATGGTTGAAGAAGAAAACATATCACACCAGACTCAATCAGATGATTATACTTGTTCTACAAGTTATAGTGAGTAA 3903 0.3853 MELYGSWSCGTIINLTYPFWGGNRPDYCGEPYLSVSCESDVPKFSVNSVTYRILGWDMKTQNLTVARDDLWDNLCLTSYHTTTFDGTIFHFDNNLTNVTLLYDCRSNNPPTGNSRSCSDGKSVYYALGSSGFEYCTSVFVPIFESQVGTVSGNINLISQALQVGFGLDWENYDECNTCMDSGGVCIVYDGKFSCCKDESSCPGSGDKKSKVGVAIGAAAGAVALVAILGIVWFMVKRKKKVAASKQSMSEDLFTPPSSNGAFTSTTNMSQSVPSYTSSKTDSVPPMKSFYFGVQVFTIAELEEATDNFNPSRELGDGGFGTVYKGELKDGRVVAVKRHYESNFKRVRQFMNEVEILARLRHKNLVTLFGCTSRHSRELLLVYEFISNGTVDDHIHGNRANSNFVSWPVRLNIAIETAEALAYLHASDVIHRDVKSNNILLDDNFCVKVADFGLSRLFPNDATHVSTAPQGTPGYVDPEYYQCYQLTDKSDVYSFGVVLIELISSLQAVDVNRHRNDVNLANMAVNKIQNQEIHDLVDPNLGYDKDNGIRRMTTEVAELAFRCLQQQRDMRPSMDEVLEVLRGIKSDEHDATREADVVNVRTEEVMLLNNVHYPLSSTDSFDDKQAGLRDRASLTHVTLAFACLTDSSRDAKKNNLRTCAIPESDVLNKHSELHWKVDFGDIYDAYIYTCKYYVQDIDYNKYTILVSDVGVIDDEDSNCSFIPSYFLYEGSFGNNFIGPGTNPFKLDATITISYFNCSNMVIDDHRYVDVGTTCSDSGGHIYAVVDNSSNHDFSVMDIKIGCQLKVSTFANWGRVEYDKNKNISYDEIHNMLVYGFRLSWLYVICEDQCGKGFDCHVVDESTGEVQCDHDQLCPFLYDGPNKVIYDCDKFLTGYAVGFYAGLKHVKRGDEYDGIGANIGEAMGRYIPPYIIVRYLLGLVAFILLLIYKWRRRHKSMYENIEDFLQRDTFMPIRYSYKEIKKMTYGFREKLGQGGFGLVYKGKLRSGSFVAIKMLTKSKDNGQDFISEVGTIGRIHHANVVRLIGFCVEGSTKALVYEFMPNGSLDKYIFSKQDNVLLSYEKIYEISLGVAHAISYLHNDCDMQILHFDIKPHNILLDENFVPKLSDFGLAKLYPVDKNVVTMTGARGTLGYMAPELFYHNLGGVSYKADVYSFGMLLMEMASRRRNFISNVESDVQSSSQLYFPMWIYDQLDKDKDIELENLTKEENEITKKMIIVALWCIQLKPSDRPSMYKVVEMLEEESESIEMPPKPSLYPRQMVEEENISHQTQSDDYTCSTSYSE 1300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g1725 1300 MobiDBLite consensus disorder prediction 1280 1300 - -
Lal6g1725 1300 SUPERFAMILY Protein kinase-like (PK-like) 969 1258 IPR011009 -
Lal6g1725 1300 Pfam Protein kinase domain 310 578 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal6g1725 1300 Pfam Protein kinase domain 985 1255 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal6g1725 1300 ProSitePatterns Protein kinases ATP-binding region signature. 314 336 IPR017441 GO:0005524
Lal6g1725 1300 Gene3D Phosphorylase Kinase; domain 1 959 1057 - -
Lal6g1725 1300 Gene3D Phosphorylase Kinase; domain 1 283 384 - -
Lal6g1725 1300 CDD STKc_IRAK 314 583 - -
Lal6g1725 1300 ProSiteProfiles Protein kinase domain profile. 983 1264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal6g1725 1300 Gene3D Transferase(Phosphotransferase) domain 1 385 605 - -
Lal6g1725 1300 Gene3D Transferase(Phosphotransferase) domain 1 1058 1269 - -
Lal6g1725 1300 MobiDBLite consensus disorder prediction 1260 1300 - -
Lal6g1725 1300 Pfam Wall-associated receptor kinase galacturonan-binding 8 66 IPR025287 GO:0030247
Lal6g1725 1300 PANTHER RUST RESISTANCE KINASE LR10-RELATED 686 1283 IPR045874 GO:0004672
Lal6g1725 1300 PANTHER RUST RESISTANCE KINASE LR10-RELATED 300 583 IPR045874 GO:0004672
Lal6g1725 1300 SUPERFAMILY Protein kinase-like (PK-like) 282 585 IPR011009 -
Lal6g1725 1300 ProSitePatterns Serine/Threonine protein kinases active-site signature. 428 440 IPR008271 GO:0004672|GO:0006468
Lal6g1725 1300 CDD STKc_IRAK 989 1259 - -
Lal6g1725 1300 SMART serkin_6 308 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal6g1725 1300 SMART serkin_6 983 1264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal6g1725 1300 ProSitePatterns Protein kinases ATP-binding region signature. 989 1011 IPR017441 GO:0005524
Lal6g1725 1300 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 686 1283 - -
Lal6g1725 1300 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 300 583 - -
Lal6g1725 1300 ProSiteProfiles Protein kinase domain profile. 308 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal6g1725 1300 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1103 1115 IPR008271 GO:0004672|GO:0006468
Lal6g1725 1300 Coils Coil 1207 1227 - -
Lal6g1725 1300 Pfam Wall-associated receptor kinase C-terminal 128 197 IPR032872 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g1725 Lal-Chr6 19950782 19964206 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g1725 7 623 Receptor kinase-like Gene Family AT1G25390 42.991 1.73e-147 459
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Lal6g1725 Pkinase 5.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g1725 - - cam:101490779 710.294