Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g1693 ATGGCAAAGAATGATGAGGGCATTGCTATAGGAATAGACCTTGGTACTACATATTCATGTGTTGCAGTATGGGAGAAACAACACAATCGAGTTGAAATCATTCATAATGACCATGGCAACAGGATTACTCCTTCTTTTGTTGCCTTCACAGATGATCAAAGATTGATTGGAGAAGCTGTTAAGAACCAAGCTGCCACTAACCCAACTAACACTATCTTCGATGCTAAGAGGTTAATTGGTAGAAAATATAGTGACCCTGTTATTCAGAATGATTTGTTGTTGTGGCCATTCAAGGTCATAAACAGTAATGATGAAAAACCAATGATTGTAGTTAATTATAAGGGTAAAGAGAAGTACCTCTCCCCTGAAGAAATATCATCCATGATCCTCTCGAAGATGCGCGAGGTTGCAGAGTCATACTTGGAGTCACCTGTGAAGAATGCAGTAGTTACAGTGCCTGCTTATTTCAATGACTCTCAACGTCAAGCGACGAAAGATGCTGCAACTATTGCTGGCCTTAATGTCATGCAGATAATCAATGAACCTACTGCCGCCGCTCTTGCATATGGTCTTGACAAAAGAGCTAATCGTGTCGATGAGCGAAATGTTTTTGTTTTTGACCTCGGTGGTGGTACTTTTGATGTGTCTCTACTTACTATTAAGGGTAAGATTTTCAGAGTTAGGGCCACTGCTGGAGACACTCACCTGGGAGGGGAAGACTTTGATAACAGAATGGTAAACTATTTTGTACAGGAGTTCAAAAGGAAAAACAATGTGGACATTAGTGGAAATCCAAGAGCTCTACGGAGGTTGAGGAGTGCGTGCGAGAGAGCGAAAAGGGTACTCTCTTTTTCTGCTAATACCACCATTGATGTGGACTCATTATTTCAGAGCATTGACTTTTCTTCATCTATCACTCGTGCGAAGTTTGAGCAACTCAACATTGACCTCTTTAAGAAGTGCATGGAACCAGTGAAGCAGTGTCTTAGGTTCGCAAAGATGGCAAAGAGCAGCGTTCATGATGTTGTACTTGTTGGTGGCTCAACAAGGATTCCCAAAGTTCAGAAGCTGTTGCAGGATTTCTTCAATGGAAAGGAACTTTACAACAGCATCAACCCCAATGAGGCCGTTGCTTACGGTGCTGCTGTCCAAGCAGCTGTGTTGAGTGGTGAAGTTAATGAGATGCTTCAAGATTTGTGTCTTTTGGATGTCACCCCATTGTCCCTAGGTATCCTGACTGAAGGAGGTCTTATGACAGTATTAATTCCTAGGAATACTCCAACTCCTACTAAAAAGGAGGACCTGTTTACTACAGTTAAAAATAACCAACCTAGTATTTTGGGTAAATTTAAGTTTTCCGGCATCCAGCTAGCACGCCGAGGTGTTCCTCAAATCAATGTGTGCTTTGAGATTGATGCCAATGGTATTCTGAATGTCTCTGCTCGGGACAATACCACCAGGAACAAGAAGATTACCATTACCAATGACAAAGGAAGGTTGTCAATGGTAGAAATTGAGTGGATGATTCAAGAAGCTGAGAAATACAAGTCTGAAGATGAGGAACGTAAGAAAAAGATTGAGGCAAAGAATGCCTTGGAGAATTATGCATACAACATGACAAACACCATAGAGGATTATGAGATCAGCTCAAAGCTTTCTACAACAGACAAGACAAAGATTGAGAATGCAATTCAGCAGGCATTTCAATGGCTTGCTGCAAATCCGCATGCTGAAGCTGATGAATTTGATGATAAAGTGAAGGTGCTTGAGAGCATATGCAATCCTATTATGGCCAAGATGTACCAAGGTGAGTTTGACACAGGTTGTGATGATCCATCTACTTTTTCTGGCCGCAGAATTGAGCAGGTTGATTAA 1875 0.4149 MAKNDEGIAIGIDLGTTYSCVAVWEKQHNRVEIIHNDHGNRITPSFVAFTDDQRLIGEAVKNQAATNPTNTIFDAKRLIGRKYSDPVIQNDLLLWPFKVINSNDEKPMIVVNYKGKEKYLSPEEISSMILSKMREVAESYLESPVKNAVVTVPAYFNDSQRQATKDAATIAGLNVMQIINEPTAAALAYGLDKRANRVDERNVFVFDLGGGTFDVSLLTIKGKIFRVRATAGDTHLGGEDFDNRMVNYFVQEFKRKNNVDISGNPRALRRLRSACERAKRVLSFSANTTIDVDSLFQSIDFSSSITRAKFEQLNIDLFKKCMEPVKQCLRFAKMAKSSVHDVVLVGGSTRIPKVQKLLQDFFNGKELYNSINPNEAVAYGAAVQAAVLSGEVNEMLQDLCLLDVTPLSLGILTEGGLMTVLIPRNTPTPTKKEDLFTTVKNNQPSILGKFKFSGIQLARRGVPQINVCFEIDANGILNVSARDNTTRNKKITITNDKGRLSMVEIEWMIQEAEKYKSEDEERKKKIEAKNALENYAYNMTNTIEDYEISSKLSTTDKTKIENAIQQAFQWLAANPHAEADEFDDKVKVLESICNPIMAKMYQGEFDTGCDDPSTFSGRRIEQVD 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g1693 624 Gene3D - 194 368 - -
Lal6g1693 624 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 397 533 IPR029047 -
Lal6g1693 624 Gene3D - 10 386 - -
Lal6g1693 624 Gene3D - 73 128 - -
Lal6g1693 624 Gene3D Actin; Chain A, domain 4 237 320 - -
Lal6g1693 624 Coils Coil 509 529 - -
Lal6g1693 624 PRINTS 70kDa heat shock protein signature 8 21 - -
Lal6g1693 624 PRINTS 70kDa heat shock protein signature 38 50 - -
Lal6g1693 624 PRINTS 70kDa heat shock protein signature 60 68 - -
Lal6g1693 624 PRINTS 70kDa heat shock protein signature 148 168 - -
Lal6g1693 624 PRINTS 70kDa heat shock protein signature 211 221 - -
Lal6g1693 624 PRINTS 70kDa heat shock protein signature 339 355 - -
Lal6g1693 624 PRINTS 70kDa heat shock protein signature 371 391 - -
Lal6g1693 624 PRINTS 70kDa heat shock protein signature 398 417 - -
Lal6g1693 624 PRINTS 70kDa heat shock protein signature 462 478 - -
Lal6g1693 624 Pfam Hsp70 protein 9 445 IPR013126 GO:0005524|GO:0140662
Lal6g1693 624 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 393 446 IPR029047 -
Lal6g1693 624 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 447 528 IPR029047 -
Lal6g1693 624 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Lal6g1693 624 SUPERFAMILY Actin-like ATPase domain 199 390 IPR043129 -
Lal6g1693 624 ProSitePatterns Heat shock hsp70 proteins family signature 2. 205 218 IPR018181 -
Lal6g1693 624 PANTHER HEAT SHOCK PROTEIN 70KDA 1 609 IPR013126 GO:0005524|GO:0140662
Lal6g1693 624 ProSitePatterns Heat shock hsp70 proteins family signature 3. 342 356 IPR018181 -
Lal6g1693 624 Gene3D - 529 624 IPR029048 -
Lal6g1693 624 SUPERFAMILY Actin-like ATPase domain 8 193 IPR043129 -
Lal6g1693 624 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 527 604 IPR029048 -
Lal6g1693 624 PANTHER SHOCK PROTEIN, PUTATIVE-RELATED 1 609 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g1693 Lal-Chr6 19700669 19702752 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g1693 1 603 Calmodulin-binding Proteins AT3G12580 73.269 0.0 932
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g1693 K03283 - gmx:100789485 891.723