Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g1671 ATGCGCATGGAGATAACATACGCATCACCAAGTTCCCCTGATCTCGCCGCCCTCGCCGCCATGCCGTCGTCAGCCACCACAAAACGCACCGTCAGAATCATCCCCGTGCAGCACCCGACGGTGACAAATTCTTCTTCTTCTTCTTCTTCTTCATCATCATCATCGTTCGTGTTTTCAGTGTGGTTTTCGAAGCTTAGGAAAATGACGTGGATGGAATGGATCGATTCATTCTTCCCTTGTTTTCGTTGGATTCGTGTGTATAATTGGAAAGAGTATTTTCAAGTTGATTTTATGGCTGGAATCACCGTTGGTGTTATGCTTGTTCCTCAGGAAGACTCTTGTTTCGTGCCCATATTTGTTTATGCCATATTTGGGTCTTCTCGCCAGCTTGCTGTTGGCCCAGTAGCCTTGGTTTCTCTCTTGGTCTCTAATGTGCTAAGTGGCATAGCTGATCCATCCAGTGAATTATACACAGAGTTGGCAATATTATTGGCTCTTATGGTTGGGATACTGGAATCCCTAATGGGACTCTTGAGGCTAGGATGGCTGATTCGTTTCATTAGCCATTCAGTGATCTCTGGCTTTACAACTGCTTCAGCTATTGTGATTGGTTTATCTCAAGTGAAATACTTCTTGGGGTATAATATTGACAAAAGTAGCAAGATCATACCACTGGTTGAGAGTATAATTGCTGGAGCAGATAAGTTTTCATGGCCCCCTTTTGTGATGGGATCAGTCACCCTTGCAATATTGCTTACCATGAAGCACCTGGGAAAATCGAGGAAGCACTTGCGGTTCTTGAGAGCATCCGGTCCTCTCACAGCAGTAATTTTGGGAACAGTTTTTGTAAATATATTCCATCCATCATCAATTTCTGTGGTGGGAGATATACCTCAGGGCCTTCCAAAATTTGCTGTTCCTAGAGCTTTTGAGTATGCAGCGTCCTTAATTCCAACCGCTTTTCTCATAACTGGTGTGGCGATATTGGAATCAGTGGGAATTGCCAAGGCATTAGCAGCAAAGAATGGCTATGAGTTGGATTCAAATCAAGAGCTGTTCGGTCTTGGTGTTTCCAATATTCTTGGTTCGTTCTTTTCAGCATACCCCACCACTGGATCCTTTTCAAGGTCAGCAGTCAACCATGAAAGTGGTGCAAAATCAGGAATATCTGCGATTGTTTCAGGAATTCTAATGACCTGTGCACTTATGTTCTTAACTCCATTATTCGAGTCCATACCTCAGTGTACTCTTGCTGCCATTGTGATCTCTGCTGTGATAGGTCTGGTAGATTATGATGAGGCCATTTTTTTGTGGCGTGTAGATAAGAAAGATTTTCTACTTTGGACCATTACCAGCACAACTACGTTATTCCTTGGTATTGAGATTGGCGTAATTGTTGGGGTTGGTGTTTCACTTGCTTTTGTCATTCATGAGTCAGCAAATCCACATATTGCTATTTTGGGACGTTTGCCAGGAACAACTGTTTATAGAAATGTTAAACAGTATCCTGAAGCATATACATACAATGGAATTGTAATTGTTCGTATTGATGCTCCTATTTATTTTGCAAACACAAGTTACATAAAGGACAGGTTGCGGGAATATGAAGTTACTGCTGATACTTTTACAAGACATGGACCTGATGTTGAAAGAATTTATTTTGTTATTCTAGAGATGGCTCCTGTGACCTACATAGACTCTAGTGCTGTTCAAGCTTTGAAGGACTTGTATCAGGAGTACAAATTACGCGACATTCAGATTGCAATATCCAATCTAAACCCAGATGTTCTGCTTACACTGTCTAAATCTGGTGTGGTGGAGTTGATAGGCAAAGAATGGTACTTTGTGAGAGTACATGATGCTGTTCAAGTTTGCTTGCAGCATGTGCGAAGTTCGGAAAGGGGATCTAACAACAGTTCACAAACATCGCTCGCTTTATCAGACGATAAACCGAGTTTCTATGGGCAGTTACTAAAACAAACTGGAGAGAACCTTCCAATTTCCGACCTGGAGTCTGGTAAGGGAAGATCTCCACTTTCCAGGGACAGAGATCCTCACTTGGAGCCATTGTTGTCAAAAGAACATTGA 2088 0.4234 MRMEITYASPSSPDLAALAAMPSSATTKRTVRIIPVQHPTVTNSSSSSSSSSSSSFVFSVWFSKLRKMTWMEWIDSFFPCFRWIRVYNWKEYFQVDFMAGITVGVMLVPQEDSCFVPIFVYAIFGSSRQLAVGPVALVSLLVSNVLSGIADPSSELYTELAILLALMVGILESLMGLLRLGWLIRFISHSVISGFTTASAIVIGLSQVKYFLGYNIDKSSKIIPLVESIIAGADKFSWPPFVMGSVTLAILLTMKHLGKSRKHLRFLRASGPLTAVILGTVFVNIFHPSSISVVGDIPQGLPKFAVPRAFEYAASLIPTAFLITGVAILESVGIAKALAAKNGYELDSNQELFGLGVSNILGSFFSAYPTTGSFSRSAVNHESGAKSGISAIVSGILMTCALMFLTPLFESIPQCTLAAIVISAVIGLVDYDEAIFLWRVDKKDFLLWTITSTTTLFLGIEIGVIVGVGVSLAFVIHESANPHIAILGRLPGTTVYRNVKQYPEAYTYNGIVIVRIDAPIYFANTSYIKDRLREYEVTADTFTRHGPDVERIYFVILEMAPVTYIDSSAVQALKDLYQEYKLRDIQIAISNLNPDVLLTLSKSGVVELIGKEWYFVRVHDAVQVCLQHVRSSERGSNNSSQTSLALSDDKPSFYGQLLKQTGENLPISDLESGKGRSPLSRDRDPHLEPLLSKEH 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g1671 695 TIGRFAM sulP: sulfate permease 79 621 IPR001902 GO:0015301|GO:0016020|GO:0055085
Lal6g1671 695 Gene3D STAS domain 481 629 IPR036513 -
Lal6g1671 695 Pfam Sulfate permease family 113 451 IPR011547 GO:0016021
Lal6g1671 695 Pfam STAS domain 502 621 IPR002645 -
Lal6g1671 695 PANTHER SULFATE TRANSPORTER 4.1-RELATED 48 656 - -
Lal6g1671 695 MobiDBLite consensus disorder prediction 675 695 - -
Lal6g1671 695 ProSiteProfiles STAS domain profile. 501 625 IPR002645 -
Lal6g1671 695 MobiDBLite consensus disorder prediction 664 695 - -
Lal6g1671 695 SUPERFAMILY SpoIIaa-like 503 625 IPR036513 -
Lal6g1671 695 CDD STAS_SulP_like_sulfate_transporter 502 618 - -
Lal6g1671 695 PANTHER SULFATE TRANSPORTER 48 656 IPR001902 GO:0015301|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g1671 Lal-Chr6 19471447 19481335 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g1671 5 633 Inorganic Solute Cotransporters AT5G13550 69.878 0.0 916
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g1671 K18059 - gmx:100794754 1079.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g1342 22 16324670 16335043 Lal6g1671 6 19471447 19481335 LSH